Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01525 ATGGATTCTTCTTCTTTCAATCATGGATATGTTTACCATGTTTTCTTAAGCTTTAGAGGAGAAGATACACGTGAGACTTTTACTGGCCACCTTTACAATGCTCTTGATCAAAGAGGAATCAACACTTTCATAGATGATGAAGGCTTAAGAAAAGGTGAAGAAATTTCACAATCTCTTCTTAAAGCAATAGAAGAGTCAAGAATTTCCATTATCATATTTTCTAAGAACTATGCTAATTCGACTTGGTGTCTTGATGAACTTGTGAAGATTCTTGAGTGTAAAAAAGATAAAGGACAAATTGTTTGTTCGGTTTTTTACGACGTTAATCCGTCAGACGTGAGACACCAGAGAGATACTTATGAAGAAGCTTTTTGTATGCTTGAAGAAAAATTTAGAGATAATATGGAGAAAGTGAAGAAATGGAGATTGGCTTTGACTCAAGCTGCAAATCTTTCTGGATGGCATTTCAATAATGGGTATGAATTTAAATTTATCCAAAGTATAGTAGATGAAGTATCAAGAAAATTGAATAGAATCCCTCTAAATGTTGCAACACACCCTATTGGACTACAAGCTCGTGTATCAGATGTTACATCACTCTTACAACTTGAATCCAATGATGTTAAAATGATAGGAATTCACGGTATCGGAGGAATCGGCAAAACAACGATTGCAAAAGCTGTTTACAACACAATCTACAATCGATTTCGATATGCGAGTTTCCTCGCAAATGTCAGAGAAAATTCAAGGCATAAGTCTGGCTTAGTGAAACTCCAAGAAAAACTTCTTTTTGAGTTACTTGGAGAGCAAGGAATTAAATTAGGTAATGTTGATAAAGGAATCAATGTAATAAAAGATAGGTTATGTAGAAAAAAGGTTTTACTTGTTATTGATAATGTTGATGATGTTGAACAATTACAAGCTTTAGTTGGAGGATTTGATTGGTTTGGTTTAGGAAGTAAGATCATCATAACCACTAGAGATAAACATTTGTTAACTTCTCATGAAATTGGTTTAACTTATGAGGTTAAGAAGTTGAATCATGTTGAGTCTCTTCAATTGTTTAGTTGGAATGCATTTAAAAGAAGCGAACCGGACGATACTTTTTTCGATGTTTCGAATCGCGCTGTTTTGTATGCAGAAGGACTTCCATTGGCTTTAACTGTTTTAGGTTCTGATTTGTGTGGTAGAACCATTCATCAGTGGAAATCTGCATTGGATAAGTACAAAAGAAGTCCTAATAGGAAAATTCAGGATATACTTAGAATAAGTTTCGAGGGTTTGGAAGAAAATGAAAAGGAGATTTTTCTGTATATAGCTTGTTTCTTTAAAGGTGAGATTATGGAATACGCTGCGAAGGCGTTGCGCGCGTGCGATCTGCATCCGATTATCGGCGTTGCTGTGCTTGTTGATAAGTCTTTGATAAACTTGGATGAAAGAGGTGTTTTGTCAATGCATGATCTTATACAAGATATGGGGAAGGAAATTGTTAGACAAGAATCGCCGTTGGATCCTGGAAAACGTAGTAGGTTGTGGTATTATGAAGATGTTCTTCAAGTACTCGCCGATGGAACGGGAACTGATAAGATTCAAGGTATAATGTTGAGCCTACCTGAAAAGCAAGAAGTGAAGCTAAAAGCTGAAGATCTCAAGAAGATGAGAAACCTTAGAATGTTGATAATTAAGAATGCTGAATTTTTTGGAGAGAATGTACATCTACCAAACAACTTAAGGATGCTTGATTGGGAGGAATATCCTTCTCCATGTTTATCATCTGATCTCCTTCCTGAGAAAATTGTAATGCTAGAATTGCGGCGCAGTCATCTAACGTTGGACAAACCATTCAAGAACTATGCAAACATGACTTCCCTGAATCTTGGTTCATGTGAACTCCTTACAAAAATACCTGATATTTCTGGAATACCAAACTTAGAGCAAATCATTCTAGAAGATTGTACAAACTTAGTTGATATTCATGAATCACTTGGATCATTAGATAAACTAGTTTACTTAGGTGTTGAAAGGTGCACTGAACTAAAGAAGTTACCAACTGTCCTAAACATGCCATCATTATCATGCATTGCTCTTAATGGTTGTTCTCAACTTGAAAACTTCCCAGATTTGTTTGGAAATATGGAAAATCTTCGAATCGTCGAGGTGGAAGAGACAGCAATACAAGAATTGCCTTCTAGTATTGTTAATTTCAACAACCTTCAGATTTTAGTACTAAAGTCTTGCTCAAATCTTAAGAATCTTCCAAGGAACATTTCTTTGTTGCCAAATCTTCAGTTACTTGATGTTTCTGGTTGTCCAAAACTTCAACTATTTCAAGAGAAGCTTAGTTGTTTTAGCACACAAAATTTAGAGTCCAATGAATGTTCATTACCATCAAAACCATGTGTAGATTTTGACTCTTTAGGCATACAATCTTCACATGGTTTTCATTTATTGGAAAATCTTGATCTTAGTGATTGCAATCTATCAGATGATGATCTACATATCCTTAGTTGCTTTTCCAAACTCAATTCCTTAGACATATCAAGAAACAATTTTGTAACCCTACCTAAATGTTTCAACAGACTTAGTAGCTTGCAGGAGCTTTACATTTTCAATTGCAAGAATTTTCAACAAATTTCTGGGATTCCACCTAATTTAGAACATATAGATGCTACTAGTTGCACAGTGTTGAATTCAGAATCATTGAACCTGTTGTTATGCCAGGGATTACATAAGGCATTTAAATTTGAAGTTATAGTACCAAGGCCAAGGATACCAATGCCATTCAAGTTCAACTACCATAACAAAGGAGGATCCATTTCATTCTGGATTGGCCAAAAGTTCCCAAGAATTGCTCTTTGCTTCATTTTTGAACTAGGAAATAAAAGAATTGGTTTCTTTGCATGTGATGTTCAGATATCTATTAATGGACAAAAAGCATCCAATAAAGAACAGTACTTCCTTTCAGTTTCTGGTGATCTTGTATGGCTGTATCATCAAGAAAATTTGATGGACTTAAATACATATTTACTGCATGAACAGAATAATGTGGAAGTTTCTTGCGAAATTATAGATGCGAGTAAAGGCGCAGATGTGACGATATACTATTGTGGAGTTCATGAGTATAAGGAAGATGAGGAAGTGAAGAAAACAAATTTGATATTGTGCACAAGTTCTAGTCCTTGTAATAATGGTTACTTGGATAACACTCAATCATCTAAGGAAAGACATGAAAATCAATGTCATTATGAAGATAGCTTGGGAATTGATTGCTGCTCCTTGAATGAGAGTTTAAGGCTTCATGAAATATCAGATAAACAGATGCAACAGATTTCGGCTTCGATTAGGCCAGTAATTATTGAAGTTAATGAAAAGACTACAGATATTTTGGAAGCTGATACAATACATGAAAGCAAGGACATATCTTCATTGGATATGCAGCTATATGGTGATAGAATTTGGGATCCAATGCTATTAGAGTATCAGTTGAACTGCCACACCTTTGAGAACAAAGAGAACATAAGAATGATAGTAGATGATGTCCAAGTGGAGCCACAAGGAAGACATGAGGCATCAATTATTGCTGCAAATGTTGTAAGCAACAAGGGAGAACTACAAGTGCAAGAGCATGGAGATAAGAGCAATGAAAATTCTTTGATTCATATGGAACACAAAAAAAGTCAAAGTGAAGAGAATATGGAAGCATTTTATGCTTCCCTTTATGCTGAGACATATGCTTCATTAGGAGATACAAGTGATCATTCAAAATTGGCTTATCCTAAAATGACTGAAGAAACCAGGAAAGCCTTGAAAATTCTTAAAGAACTTTTGTCAAAACAAATTTTTCATCTTCTTGAACCAACATCATCCACATCCATAAAAACTACTTTGGATTATCTGTGTACTTCATTTGAAGATAATGTGTCAATGAGGTTAAAGTCTTTAATACTAAAACTTTCAGCTGAGTTTAGTCAATGGAGTTGTGACTACAATGATGCAAACATGAAACTTGAGTCCTCAATTTTAGTGCTATCAAAGCTGCAAGAACTTGAAGAGGGTCTTGAAGCTAACAAGGACCAGTTCAGTGAATTTTTGTCAATAGAAAGTGAGTTGGAAAGCCAATTAGTATATTTGAAAGAAAGAATGAAAGAGCTGGAAGAGAAAATTAATGCCATTAAAATGAACATTTCCATTTCTGATGGGGCTAGGGACACTGCACTTAGAAAGAAAAGAGAAACCTTTGAGGCAGGAAGAGTGTTGAAAGCTCAAAGAGATGAGTTGAGGAAGCGAAGGTTGCGGTTGAGAGCGGAACAAGAATCAGCCAAAGCTACCAAAGGATACATTGAAGATGAGTGGTCAAAGATTAGAGAGAAATTTGATAGAATCTTGAAAACCTTTGGGTTAGATTATTGA 4410 0.3524 MDSSSFNHGYVYHVFLSFRGEDTRETFTGHLYNALDQRGINTFIDDEGLRKGEEISQSLLKAIEESRISIIIFSKNYANSTWCLDELVKILECKKDKGQIVCSVFYDVNPSDVRHQRDTYEEAFCMLEEKFRDNMEKVKKWRLALTQAANLSGWHFNNGYEFKFIQSIVDEVSRKLNRIPLNVATHPIGLQARVSDVTSLLQLESNDVKMIGIHGIGGIGKTTIAKAVYNTIYNRFRYASFLANVRENSRHKSGLVKLQEKLLFELLGEQGIKLGNVDKGINVIKDRLCRKKVLLVIDNVDDVEQLQALVGGFDWFGLGSKIIITTRDKHLLTSHEIGLTYEVKKLNHVESLQLFSWNAFKRSEPDDTFFDVSNRAVLYAEGLPLALTVLGSDLCGRTIHQWKSALDKYKRSPNRKIQDILRISFEGLEENEKEIFLYIACFFKGEIMEYAAKALRACDLHPIIGVAVLVDKSLINLDERGVLSMHDLIQDMGKEIVRQESPLDPGKRSRLWYYEDVLQVLADGTGTDKIQGIMLSLPEKQEVKLKAEDLKKMRNLRMLIIKNAEFFGENVHLPNNLRMLDWEEYPSPCLSSDLLPEKIVMLELRRSHLTLDKPFKNYANMTSLNLGSCELLTKIPDISGIPNLEQIILEDCTNLVDIHESLGSLDKLVYLGVERCTELKKLPTVLNMPSLSCIALNGCSQLENFPDLFGNMENLRIVEVEETAIQELPSSIVNFNNLQILVLKSCSNLKNLPRNISLLPNLQLLDVSGCPKLQLFQEKLSCFSTQNLESNECSLPSKPCVDFDSLGIQSSHGFHLLENLDLSDCNLSDDDLHILSCFSKLNSLDISRNNFVTLPKCFNRLSSLQELYIFNCKNFQQISGIPPNLEHIDATSCTVLNSESLNLLLCQGLHKAFKFEVIVPRPRIPMPFKFNYHNKGGSISFWIGQKFPRIALCFIFELGNKRIGFFACDVQISINGQKASNKEQYFLSVSGDLVWLYHQENLMDLNTYLLHEQNNVEVSCEIIDASKGADVTIYYCGVHEYKEDEEVKKTNLILCTSSSPCNNGYLDNTQSSKERHENQCHYEDSLGIDCCSLNESLRLHEISDKQMQQISASIRPVIIEVNEKTTDILEADTIHESKDISSLDMQLYGDRIWDPMLLEYQLNCHTFENKENIRMIVDDVQVEPQGRHEASIIAANVVSNKGELQVQEHGDKSNENSLIHMEHKKSQSEENMEAFYASLYAETYASLGDTSDHSKLAYPKMTEETRKALKILKELLSKQIFHLLEPTSSTSIKTTLDYLCTSFEDNVSMRLKSLILKLSAEFSQWSCDYNDANMKLESSILVLSKLQELEEGLEANKDQFSEFLSIESELESQLVYLKERMKELEEKINAIKMNISISDGARDTALRKKRETFEAGRVLKAQRDELRKRRLRLRAEQESAKATKGYIEDEWSKIREKFDRILKTFGLDY 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01525 1469 ProSiteProfiles TIR domain profile. 10 176 IPR000157 GO:0007165
Car08g01525 1469 Coils Coil 1367 1394 - -
Car08g01525 1469 Pfam TIR domain 12 180 IPR000157 GO:0007165
Car08g01525 1469 Gene3D - 345 429 IPR042197 -
Car08g01525 1469 SUPERFAMILY L domain-like 485 904 - -
Car08g01525 1469 Gene3D Ribonuclease Inhibitor 701 912 IPR032675 -
Car08g01525 1469 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 1441 - -
Car08g01525 1469 PRINTS Disease resistance protein signature 210 225 - -
Car08g01525 1469 PRINTS Disease resistance protein signature 287 301 - -
Car08g01525 1469 PRINTS Disease resistance protein signature 380 394 - -
Car08g01525 1469 PRINTS Disease resistance protein signature 757 773 - -
Car08g01525 1469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 439 IPR027417 -
Car08g01525 1469 Coils Coil 1423 1443 - -
Car08g01525 1469 Gene3D Ribonuclease Inhibitor 529 700 IPR032675 -
Car08g01525 1469 Gene3D - 180 339 IPR027417 -
Car08g01525 1469 Pfam NB-ARC domain 203 415 IPR002182 GO:0043531
Car08g01525 1469 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 154 IPR035897 -
Car08g01525 1469 Gene3D - 7 179 IPR035897 -
Car08g01525 1469 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 1441 IPR044974 GO:0006952
Car08g01525 1469 SMART till_3 11 151 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01525 Car-Chr8 24303496 24310789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01525 6 778 WRKY Transcription Factor Family AT4G12020 31.652 1.54e-90 323