Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01524 ATGAAACATAAAAAAATTTCTTCCTCTTCCTTCAACCATGGTTGGACTTATGATGTTTTTGTTAGTTTCTATGGCGACGATACGCGTTACGGTTTTACAGGCAATCTTTGTAACACCTTAAATATTAAAGGAATCAACACTTTTAAAGATGACATCAAACTTAAGAAAGGAGAAGAGATTTCAATCGATCTTCTCGAAGCGATCGATGAGTCGAGGATTGCGATAATTGTTTTTTCGGAAAATTATGCATCATCAACTTGGTGTCTTGATGAACTTGTGAAGATCATGGAGTGTAAGAAGGAAAAGGGACAATTGGTTCGTATAGTTTTTTACTATGTTGACCCTTCAAATGTAAGGCATCAAAGGGGAAGTTTTGGAAGGTCAATGACTATGCATGAAGAAAATATGAACATTAATAAAGAAAAAGTGTGTAAATGGAGAAGTGCACTTTCAAAGGCAGCAAATTTATCAGGATGGCATTTCAAAAATGGGTATGAATTTGAATTAATTCAAAAGATAACTGAAGAAATATCTAGCAAATTAAATCTTAGTCCTTTACACATAGCTGATCATCCAATTGGGTTGAATTACAAAATGTCACAAGTGATTTCACTTCTAGGAATCAAATCTAATAATGATGATGATGATGTTTGCATGGTTGGAATTTGTGGAATTGGTGGCATTGGTAAAACAACACTAGCAAAAGCTCTATATAATTCAATTTCAAGAAAATTTGATGCTTCAAGTTTTCTTGTTGATGTAAGAGAAAATTCAATGAAACATGGTCTAGTGCACTTGCAAGAAACCCTAATTCATCATTTACTTGAAGAAAATATAAAATTAGATGATGTGAGCAAAGGAATTCCTATAATAAAAAGACGAATTCGCAACAAGAAAGTTCTTTTGATCCTCGACGACGTCGATAATCTTCGACAATTAAGATCATTGGTTGGAAGAAATGATTGGTTTGGTTTAGGAAGTAAGATTATCATAACTACAAGAGATAAACAATTGTTAGCTGCTCATGGAGTTGAAAAAATATATGAAGTGAAAGAATTGAATGATGATGAAGCTCTTGAGTTATTTAGTATAAATGCTTTTAGAAAAAATGTGCCTAATGAAAGTTATATGGAGATAGCAAAAAGTGTAGTGAAATATGCAAAAGGCCATCCATTGGCTTTGAATGTAATAGGAAGTGATTTGTTTGGCAAAACAATAGAAGAATGGAAAAGTGCATTGAAAAAATATGAAACAATTCCAAACAAAGAGATTTTGAATGTGCTTAAAGTTAGTTATGATAATTTGGATGATAATGAAAAGGAGATTTTCCTTGATATTGCTTGTTTCTTCAAAGGATATTTGAAGGAAGATGTCGAAAAGACACTAGACGCGAGTCGATTTTATTCGAAATATGGAATTGGAGTACTTGTTGACAAATCTCTTGTAACAATTAATGAGTCCAATTCAGTTAAGATGCATGATCTTGTACAGGATCTTGGTAAAAACATTGCTAGGAAGGAGTCTCCGTTCGATCCGAGCAAACGAAGAAGATTATGGCATCATGAGGATGTCTTTGAAGTTTTGACAAAAAACACGGGAACTGATACAGTAGAAGGAATTGTGTTGGACATGCCTAACCTAAAACAAGAAGTTCAGTTAAATGCCAACACCTTTGATAATATGAGAAGGCTTAGAATCCTTATAGTTAGGAATGGACAAGTTTCTGGAGTTCCTCAAAATCTTCCAAATAATTTGAGAATGCTTGAGTGGAACAAATATCCTTTAACATCTCTACCTGATAATTTTCATCCAAAGACACTTGTTGTACTCAATTTGCCACAGAGTCATATTGTAATGGATAAGCCATTCAAGAAGTTTGAGCACTTGACTTTTATGAACTTCAGTGATTGTGACACTCTAACAAAACTACCTGATGTCTCAGAAACTCCAAATCTAACAAGAATTCTTGTTAACAATTGTCCAAACTTGGTTGACATTCATGATTCTGTTGGAGATCTTGACAAACTAGTCACATTGAGCACTGAAGGATGCCCTAAACTCGAAAGTTTTCCGCGCGGCCTAAGATCGAAATATCTCGAATACCTTAACCTCAGAAAGTGTTCTAACATTCATACTTTCCCAAATGTATTGGAAAAAGTTGAAAACATGAAAAATATTGACATAGGAGGAACATCCATAAAAAACTTTCCAAGTTCAATTGAAAACTTCAATGGCCTTGAAGAATTAGTATTGACATCATGCTCAAATGTTGAGGATCTACCTAGTAATACAAATTTGTTTCAAAATATTGAAGAACTTAATGTAGAAGGATGTCCACAACTTCCAAAACTTCTATGGAAGTCATTGGAAGACAGGACTAATGATTGGCTTCCAAAGTTAAGTAATCTTAGTCTCAAAAATTGTAATCTTTCAGATGAAGATCTTGAGTTAATTCTCAAATGTTTTCTACAATTGAAGTGGTTGATCCTATCAGATAACAACTTCTTGACCATTCCTGATTGCATTGAAGACCTTTCTCATCTCTTGCTTCTTAACATACAAAATTGCAAGCATCTTAGAGATATTTATGTGCTTCCACCATACTTGCAATATATAGATGCAAGGAAGTGCTTGGAATTGACTCCTCAATCGTCAGAAGTACTATTGAGTCAGGCATTTCAGGAGGTTGAGTACATAGACATAGTGGTTCCAAGGACAAAAATTCCAAGTTGGTTTGATCATTGTAATAAAGGAGAATCTATCGCCTTTTGGATTCGTCGAAATTTCCCTGCAATTGCTCTATTTTTTCTTTTAAGTGGTGATGATGAAAGCAGAAGCAATTATACATGTGAGTTTTGCATACTAATCAATGGAATCCAAGTATTCCAAGGAAGAAGCGAGTGGCCGGTCGATCATGTATGGCTGTTTGATCTGCGAATTCACCTCACCGCGAGCAAGTGGCAAGGCTTCAATGAACAAATAAAATCTGGTTGGAATCAGGTGGTGATTTCATGTTCAGTCATTGATGAGTCAAGAAGTTTAAGTATTAAATGTTGTGGAATTCATCTATACAAAGATAGAATGAATATCCACCATGTGTCCTTCATAAGTCCTGATCTTCATGACTCAAATATGGTCCATGATAATGATAGTTTGGATATCTATGATGAAGTAAGAGAAGATGTTGTTTTTCCTACAATATTAGCTAAATATTTTGACAAGACTATATTAGAGGTCTTGGAAAATCTTCAATCCAGCAAGAGAAAAAAGGATAATGAATATGACTTTGATGAGGAGTTGGAACTGGACAGTGACACTGACATTGACAGACAGGACATGGAAGAGGAACAACATTCAGCTTCTCTCAATCATCTAATCCTTGAAACCTGTGAAATTGTGAATAAGGACAATGGAAAAGATACCAATTTGCTTGATCCTTCGACTGAACCCCTTGTTACAAGTATCCATAACAAGGAGCCATTACTTGCACAAAAAGAAAAGTTGAAGGAGGTTGAAAATTTTGCATCAGAATCAAATACCATTGCATCAACAAGCAGAAACAAGGAAACACAGTTGGATGATAAAATCACTTTTGTTGAACAAATCAATGTTGATTCAATAAAAAGCAAAGAACATATCCTAAATGAAGACAATATGGAAGAATTTTATGCATCACTTGAAGCAGAAACAACTTCTCCTTTACATGTTCAAGACAACCAATCCAACAATTTATCTGTGAGAATTAGGCCTAGTGAAGAAACTCAAAAAGCATTGCAAATTCTACAAGACTTTGTCACAAAACAATTTTCTCTTTTGTTGCATCCCGGACGTTCCGGATTGATGAAAGATATTCTAAAGTACCTGCTTAGTTTACCATCAAATGAAGAATTTTCTGTTAAAACAAAATCAGTATTACTCCAACTTTCACAAAGTTTTTCTCAGTGGAGTTTGGACTACAACAATGCAATCCTTAAACTTGAGTCAGCAACAACAAACCTATCAAAAGCTGAGAATCTGAAGGATGATCTTGAAGCTAATGTTAAAGATTTTCGAGAAACGGACATGGTCGACAAGTTTTTGTCGAATCAGTTGGCTTGTTTGATGGAAGAGAAGAGAGAACTTGAAGAGAAAATCAATGCCATAAAAGGTGAGATTGCAGATTTTTCAGCTCAGAAAGACATGGTAGGTAAGAGAAAGAAAGAATTGTTTCACAAAGGAAGTGTGACGAAAGGTGAAAGGGATGGTTTGAGGAACCAAATTCCAAGGTTGAAAGCTGAGCAAGAATGGGCAAAGATAACACAAGCTAATATTGAAGAAGAGTGGTTAAAGCTTGGAGAACAATTCATTGGAAGCACAAAATTTGAAGAGTGCACCTTAGAACCTTCACAACATTCCTTATTTAATGAGACAAACTCTTAA 4419 0.3469 MKHKKISSSSFNHGWTYDVFVSFYGDDTRYGFTGNLCNTLNIKGINTFKDDIKLKKGEEISIDLLEAIDESRIAIIVFSENYASSTWCLDELVKIMECKKEKGQLVRIVFYYVDPSNVRHQRGSFGRSMTMHEENMNINKEKVCKWRSALSKAANLSGWHFKNGYEFELIQKITEEISSKLNLSPLHIADHPIGLNYKMSQVISLLGIKSNNDDDDVCMVGICGIGGIGKTTLAKALYNSISRKFDASSFLVDVRENSMKHGLVHLQETLIHHLLEENIKLDDVSKGIPIIKRRIRNKKVLLILDDVDNLRQLRSLVGRNDWFGLGSKIIITTRDKQLLAAHGVEKIYEVKELNDDEALELFSINAFRKNVPNESYMEIAKSVVKYAKGHPLALNVIGSDLFGKTIEEWKSALKKYETIPNKEILNVLKVSYDNLDDNEKEIFLDIACFFKGYLKEDVEKTLDASRFYSKYGIGVLVDKSLVTINESNSVKMHDLVQDLGKNIARKESPFDPSKRRRLWHHEDVFEVLTKNTGTDTVEGIVLDMPNLKQEVQLNANTFDNMRRLRILIVRNGQVSGVPQNLPNNLRMLEWNKYPLTSLPDNFHPKTLVVLNLPQSHIVMDKPFKKFEHLTFMNFSDCDTLTKLPDVSETPNLTRILVNNCPNLVDIHDSVGDLDKLVTLSTEGCPKLESFPRGLRSKYLEYLNLRKCSNIHTFPNVLEKVENMKNIDIGGTSIKNFPSSIENFNGLEELVLTSCSNVEDLPSNTNLFQNIEELNVEGCPQLPKLLWKSLEDRTNDWLPKLSNLSLKNCNLSDEDLELILKCFLQLKWLILSDNNFLTIPDCIEDLSHLLLLNIQNCKHLRDIYVLPPYLQYIDARKCLELTPQSSEVLLSQAFQEVEYIDIVVPRTKIPSWFDHCNKGESIAFWIRRNFPAIALFFLLSGDDESRSNYTCEFCILINGIQVFQGRSEWPVDHVWLFDLRIHLTASKWQGFNEQIKSGWNQVVISCSVIDESRSLSIKCCGIHLYKDRMNIHHVSFISPDLHDSNMVHDNDSLDIYDEVREDVVFPTILAKYFDKTILEVLENLQSSKRKKDNEYDFDEELELDSDTDIDRQDMEEEQHSASLNHLILETCEIVNKDNGKDTNLLDPSTEPLVTSIHNKEPLLAQKEKLKEVENFASESNTIASTSRNKETQLDDKITFVEQINVDSIKSKEHILNEDNMEEFYASLEAETTSPLHVQDNQSNNLSVRIRPSEETQKALQILQDFVTKQFSLLLHPGRSGLMKDILKYLLSLPSNEEFSVKTKSVLLQLSQSFSQWSLDYNNAILKLESATTNLSKAENLKDDLEANVKDFRETDMVDKFLSNQLACLMEEKRELEEKINAIKGEIADFSAQKDMVGKRKKELFHKGSVTKGERDGLRNQIPRLKAEQEWAKITQANIEEEWLKLGEQFIGSTKFEECTLEPSQHSLFNETNS 1472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01524 1472 Gene3D - 13 181 IPR035897 -
Car08g01524 1472 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Car08g01524 1472 SMART till_3 16 156 IPR000157 GO:0007165
Car08g01524 1472 PRINTS Disease resistance protein signature 219 234 - -
Car08g01524 1472 PRINTS Disease resistance protein signature 294 308 - -
Car08g01524 1472 PRINTS Disease resistance protein signature 387 401 - -
Car08g01524 1472 PRINTS Disease resistance protein signature 843 859 - -
Car08g01524 1472 SUPERFAMILY "Winged helix" DNA-binding domain 422 528 IPR036390 -
Car08g01524 1472 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1297 1432 IPR044974 GO:0006952
Car08g01524 1472 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 726 828 IPR044974 GO:0006952
Car08g01524 1472 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 704 IPR044974 GO:0006952
Car08g01524 1472 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 828 1263 IPR044974 GO:0006952
Car08g01524 1472 Pfam NB-ARC domain 210 431 IPR002182 GO:0043531
Car08g01524 1472 Coils Coil 1319 1353 - -
Car08g01524 1472 Gene3D Ribonuclease Inhibitor 541 695 IPR032675 -
Car08g01524 1472 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 159 IPR035897 -
Car08g01524 1472 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1297 1432 - -
Car08g01524 1472 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 726 828 - -
Car08g01524 1472 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 828 1263 - -
Car08g01524 1472 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 704 - -
Car08g01524 1472 Gene3D - 352 436 IPR042197 -
Car08g01524 1472 SUPERFAMILY L domain-like 552 886 - -
Car08g01524 1472 Pfam TIR domain 17 185 IPR000157 GO:0007165
Car08g01524 1472 Gene3D - 182 347 IPR027417 -
Car08g01524 1472 Coils Coil 1357 1391 - -
Car08g01524 1472 Gene3D Ribonuclease Inhibitor 696 929 IPR032675 -
Car08g01524 1472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 446 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01524 Car-Chr8 24285449 24298166 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01524 11 784 WRKY Transcription Factor Family AT4G12020 31.995 1.80e-97 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01524 - - lja:Lj2g3v0582820.1 2137.46