Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01505 ATGAGGAAGTCTGCTACGACAAAGAAAGTAGCTTCATCGGGTAGCCCATGGTACGGTCCAGACCGTGTGAAGTACTTAGGGCCATTCTCTGGTGAGCCCCCGTCGTACTTGACTGGTGAGCCCCCGTCGTACACTGCTGGGATTTCTGCTGACCCAGAGACATTTGCGAAAAACCGTGAACTGGAGGTAATCCACAGCAGGTGGGCTATGTTGGGAGCATTGGGATGTGTGTTCCCAGAGCTTTTGTCCCGAAATGGTGTTAAATTCGGTGAAGCTGTATGGTTCATAAAAATTATTGTCCATGatcaaaataagtga 318 0.478 MRKSATTKKVASSGSPWYGPDRVKYLGPFSGEPPSYLTGEPPSYTAGISADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFIKIIVHDQNK 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01505 105 Pfam Chlorophyll A-B binding protein 45 91 IPR022796 -
Car08g01505 105 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 95 - -
Car08g01505 105 Gene3D Chlorophyll a/b binding protein domain 24 102 - -
Car08g01505 105 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 95 IPR001344 GO:0009765|GO:0016020
Car08g01505 105 MobiDBLite consensus disorder prediction 1 20 - -
Car08g01505 105 SUPERFAMILY Chlorophyll a-b binding protein 16 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01505 Car-Chr8 23996535 23996852 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01505 1 95 Chloroplast and Mitochondria Gene Families AT2G34430 81.818 3.43e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01505 K08912 - cam:101504019 221.476