Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01495 ATGGATTCTTCATCAACCCCTCAAGTCATAACTTGCAAAGCTGCAGTGGCATGGGGAGCTGGAGAGGCATTGGTAATGGAGGAAGTGGAAGTGAGTCCTCCTCAATCATTGGAGATTAGGATTAAGGTTGTCTCCACCTCTCTCTGTCGCAGTGATCTTTCTGCTTGGCAATCTCATGCCATATTTCCTCGCATATTTGGCCATGAAGCATCTGGGATTGTTGAGAGTGTAGGGCTAGGAGTGACAGAATTCAAAGAAGGGGATCATGTGCTAACAGTTTTCATTGGAGAATGCATGTCATGCAGACCATGCAAATCAGGAAAAAGTAATGTTTGTCAAGTTTTGGGATTGGAAAGAAAGGGTTTAATGCATAGTGATCAGACGACGCGATTCTCAGTAAAAGGAAAGCCTGTTTATCATTATTGTGCAGTTTCAAGTTTCAGTGAATATACAGTTGTCCATTCTGGATGTGCAGTGAAAGTCAGTCCTCATGTACCTCTTGAAAAAATATGCCTTCTGAGCTGTGGAGTTGCTGCAGGTCTGGGCGCAGCATGGAATGTTGCAGATGTATCGAAAGGATCAACGGTGGTTATATTTGGTCTTGGAACTGTTGGCCTTTCTGTTGCTCAAGGTGCCAAACTAAGGGGTGCATCTAGAATAATTGGTGTTGACAACAATCCAAAGAAGTGTGAAAATGCTAAAGCTTTTGGGGTTACAGAAGTTGTTGATCCGAATTCGTACATAGAACCTATTGCGCAGGTTATTAAGAGCATTACTGATGGTGGAGCAGATTTTTCTTTTGAATGTGTAGGTGACACTGATATGATAACCACTGCATTGCAGTCATGTTGTGATGGATGGGGTTTGACTGTAACACTTGGTGTGCCAAAGGTGAAGCCTGAGATGTCAGCTCATTATGGACTATTCCTAACAGGAAGAACATTGAAAGGAACTCTATTTGGAGGATGGAAGCCTAAATCTGATCTTCCTTCATTAGTAGAGAAGTATATGAACAAGGAAATCCATATTGATGACTACATAACACACAATTTGCCATTTGATGAAATTAACAAAGCTTTCAATCTCATGAAGGAAGGAAAGTGTCTTCGTTGTGTTATCCACATGCCAAGATAA 1134 0.4162 MDSSSTPQVITCKAAVAWGAGEALVMEEVEVSPPQSLEIRIKVVSTSLCRSDLSAWQSHAIFPRIFGHEASGIVESVGLGVTEFKEGDHVLTVFIGECMSCRPCKSGKSNVCQVLGLERKGLMHSDQTTRFSVKGKPVYHYCAVSSFSEYTVVHSGCAVKVSPHVPLEKICLLSCGVAAGLGAAWNVADVSKGSTVVIFGLGTVGLSVAQGAKLRGASRIIGVDNNPKKCENAKAFGVTEVVDPNSYIEPIAQVIKSITDGGADFSFECVGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYGLFLTGRTLKGTLFGGWKPKSDLPSLVEKYMNKEIHIDDYITHNLPFDEINKAFNLMKEGKCLRCVIHMPR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01495 377 CDD alcohol_DH_plants 10 374 - -
Car08g01495 377 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 6 375 - -
Car08g01495 377 Gene3D - 15 370 - -
Car08g01495 377 Gene3D - 180 318 - -
Car08g01495 377 PANTHER ALCOHOL DEHYDROGENASE 6 375 - -
Car08g01495 377 SUPERFAMILY GroES-like 326 374 IPR011032 -
Car08g01495 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 339 IPR036291 -
Car08g01495 377 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Car08g01495 377 SUPERFAMILY GroES-like 6 185 IPR011032 -
Car08g01495 377 Pfam Zinc-binding dehydrogenase 204 325 IPR013149 -
Car08g01495 377 Pfam Alcohol dehydrogenase GroES-like domain 38 160 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01495 Car-Chr8 23906492 23911329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01495 15 112 Monolignol Biosynthesis Gene Families AT2G21730 37.143 1.30e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01495 K00001 - gmx:100819938 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01495 08 23906492 23911329 Car08g01495 08 23906492 23911329 ECH