Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01489 ATGAACTTTATTTTTTTCATAACATTTTTCCATGTGATTTTTTTCTTTCTTTCATTGAACATAGTTTTTTGTATTGAAATTGAAATAAAAGATTTTCATCCACAAGAAAGAGATGCTTTATTACTCATAAGAGATTCATTAAATTCTTCTATTAATTTGCATGGAAATTGGACAGGACCACCTTGTATAAACAACCTTAGTAGATGGTTTGGTATCACTTGTTCAAATTGGCATGTTGTTCATATTTTAATGCATGGTCTTAATCTTAGTGGCTATTTACCTTCAAATTTCCTTCAAAACATAACTTTCTTGAGACAAATTGATTTTTCAAACAATGCACTTTTTGGAACATTGCCAAATCTCAAAGGTTTGGTTTTCTTGGAACATGTGAAGTTTTCATTGAATCATTTCACAGGGTCAATTCCTAAGGAATATGTTGAGTTGCATAGTTTGAAAGTTTTGGAATTGCAAGAAAATTATTTAAATGGTGAAATTCCATTTTTTGATCAAACATCATTGATTAGTTTTAATGTTTCTTATAATCATTTGGTTGGGAAAATTCCTGAAAATTTTGTGTTGCAAAGGTTTCCAAAGAGTTGTTTTGATAATAATTCTGAACTTTGTGGGAAGATTTTGGATAAGTTATGTCCTTATGAACCTCATTCTCCATTTTCTGCACCCCCTCCTTTTGCTATTCCACCGCCAAGTCATAAGAAGAGACTTCAAGTTTGGATTATTGGTTTGATTTCTATTGCAGCTGCATTTTTTCTGTTTCTGATGATTGTTGGTTTCTTGTTTTGCAAAAGACAAGGTAGAGGAAATGAAACAAGAAGAAATAATACAACAAGGAATGTTTTTGGAGCATGGGCAAATAAGATGGTATCTAATGAAGGAAACAGTGGAGATTCTCAAAGATTAGGCCAACTAGAATTTTCCAACAAGAAATTTCCTGTTTTTGACATGGATGATTTGTTAAGGTCATCAGCAGAAGTGTTAGGAAGAGGAAATTTTGGTGTTACATATAAAGCAACACTTGAAATTGGTAATGTTGTTGCAGTGAAGAGACTTAACTACATGAATGAGTTGAGCAAGAAAGAGTTTATTCAGCAGATGGAATTGTTAGGACAGATGAAGCATGAAAATGTTGTTGAGATTATCTCCTTTTATTATTCAGAAGATCAAAAGCTTGTCATTTATGAACTTGTCTCTGATGGCTCTTTGTTTGAACTCCTACATGAGGGTAGAGGAATTGGAAGAATACCTCTTGATTGGACAACAAGACTTTCTATCATCAAAGATATAGCAAAGGGTCTTAATTTCCTTCATCATTTTTTGTCATCTCAAAAAGTTCCTCATGCAAATCTCAAATCATCAAATGTTCTAATCCATCAAGAAAATCAAAGTTACCATTCCAAGCTCACAAACTATGGTTTCTTGCCTTTACTCAAGAAAAATTCAGAAAAGTTATCAATAAGCAAGTCACCAGAATTTGTTAAAGGAAGAAAGCTTACACACAAAACTGATGTGTATTGTTTTGGTATCATTATGCTAGAGATTATAACTGGCAAAATTCCTGGTCATATATTAGATGAAGTTGAAGAAACAACAAACAGCGATCTTTCTGATTGGGTTAGAACTGTTGTGAATAATGATTGGTCAACTGATATTTTGGATTTGGAAATATTGGGTGAAAGAGAAGGACATGATGCAATGTTGAATTTAACGGAGATAGCTTTGGAGTGTACTGATATGATGCCTGAGAATAGGCCTAATATGAATGTAGTGTTGAAGAGAATTGAAGAGATAGAGAAAATGGAAAAAGAGAATGAGTGA 1833 0.3257 MNFIFFITFFHVIFFFLSLNIVFCIEIEIKDFHPQERDALLLIRDSLNSSINLHGNWTGPPCINNLSRWFGITCSNWHVVHILMHGLNLSGYLPSNFLQNITFLRQIDFSNNALFGTLPNLKGLVFLEHVKFSLNHFTGSIPKEYVELHSLKVLELQENYLNGEIPFFDQTSLISFNVSYNHLVGKIPENFVLQRFPKSCFDNNSELCGKILDKLCPYEPHSPFSAPPPFAIPPPSHKKRLQVWIIGLISIAAAFFLFLMIVGFLFCKRQGRGNETRRNNTTRNVFGAWANKMVSNEGNSGDSQRLGQLEFSNKKFPVFDMDDLLRSSAEVLGRGNFGVTYKATLEIGNVVAVKRLNYMNELSKKEFIQQMELLGQMKHENVVEIISFYYSEDQKLVIYELVSDGSLFELLHEGRGIGRIPLDWTTRLSIIKDIAKGLNFLHHFLSSQKVPHANLKSSNVLIHQENQSYHSKLTNYGFLPLLKKNSEKLSISKSPEFVKGRKLTHKTDVYCFGIIMLEIITGKIPGHILDEVEETTNSDLSDWVRTVVNNDWSTDILDLEILGEREGHDAMLNLTEIALECTDMMPENRPNMNVVLKRIEEIEKMEKENE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01489 610 Gene3D Ribonuclease Inhibitor 33 217 IPR032675 -
Car08g01489 610 Pfam Protein kinase domain 329 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01489 610 Gene3D Phosphorylase Kinase; domain 1 293 401 - -
Car08g01489 610 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 11 605 - -
Car08g01489 610 SUPERFAMILY Protein kinase-like (PK-like) 329 603 IPR011009 -
Car08g01489 610 Pfam Leucine rich repeat N-terminal domain 34 75 IPR013210 -
Car08g01489 610 ProSiteProfiles Protein kinase domain profile. 326 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01489 610 SUPERFAMILY L domain-like 33 192 - -
Car08g01489 610 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Car08g01489 610 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 605 - -
Car08g01489 610 Gene3D Transferase(Phosphotransferase) domain 1 402 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01489 Car-Chr8 23834762 23838217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01489 36 602 Receptor kinase-like Gene Family AT2G36570 34.127 5.70e-98 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car08g01489 Pkinase 8.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01489 - - gmx:102668068 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01489 08 23834762 23838217 Car08g01489 08 23834762 23838217 ECH