Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01474 ATGCTCATGAGAAAGAAGGATTGTGTTGTACTTGTTGGTGTTTGTGCAAGGCGTGCGTTGAAGAGAGCTTGTGGTGGCGGTGGTGCTGTCAAGAAAAGAAGAAAACACATTAATCTTTTGGAAAAGATTCCTAAAGCAAAAGAATCGAAAGCATCCGCTGAGAAACCAATGACGATAAAAACTCATTTACGTGATGTTATTATACCTCAGATAATTGGAAGCATCCTTGAGGAAACCCTGGTTGGACACTATCTCGGCGAGCTCACCATTACATACAAGCAGATTAAACATGGCAAACCTGGTATCGGCGCTACTCACCCATCTCGGAGAATTTCTTAA 339 0.4218 MLMRKKDCVVLVGVCARRALKRACGGGGAVKKRRKHINLLEKIPKAKESKASAEKPMTIKTHLRDVIIPQIIGSILEETLVGHYLGELTITYKQIKHGKPGIGATHPSRRIS 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01474 112 PANTHER 40S RIBOSOMAL PROTEIN S15 5 111 - -
Car08g01474 112 SUPERFAMILY Ribosomal protein S19 32 99 IPR023575 GO:0003735|GO:0005840|GO:0006412
Car08g01474 112 Gene3D 30s Ribosomal Protein S19; Chain A 1 112 IPR023575 GO:0003735|GO:0005840|GO:0006412
Car08g01474 112 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 5 111 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01474 Car-Chr8 23573955 23575579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01474 34 111 Cytoplasmic Ribosomal Protein Gene Family AT5G09510 43.478 6.35e-21 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01474 K02958 - nai:NECAME_02206 89.7373