Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01472 ATGGAAATAGAAGCAAGTAAAGCATCATTAGGAAATGATGTTGTTGTAACAAATTTACCAACTTTGAGTCCTTTGAGTGAAACCCTTTGGAGAGAAAAAACAAACACAGAATTGATTGGTGATGTTTCAGCAAGATTAACATGGAAAGATGTTACTGTTATGGTAACTCTTAGCAATGGTGAAACACAAAATGTTTTAGAGAATTTAACTGGTTTTGCTGAACCAGGAACTTTTACTGCTCTTATGGGACCTTCTGGCTCTGGAAAATCAACTCTTCTTGATGCACTTTCTAGTCGTTTAGCTTCAAATTGTTTTCTTTCTGGAACTATTCTTCTTAATGGTCGCAAAGAAAAGCTATCTTTTGGAACTGCTGCTTATGTAACACAAGACGACAACTTAATTGGAACGTTAACCGTACGAGAAACAATATGGTATTCAGCACGTTTGAGATTACCAGATAAAATGGCAAGGTCAGATAAAAAAGCACTTGTTGAAAGCACGATTGTAGAAATGGGTCTTCAAGATTGTGCCGACACAGTTATTGGAAATTGGCACTTGCGTGGAATAAGTGGTGGTGAAAAAAGAAGAGTTAGTATTGCTTTGGAAATATTGATGAGACCTAGATTGCTTTTCCTTGATGAACCTACCAGTGGTCTTGACAGTGCTTCAGCTTTCTTTGTGACTCAAACACTACGTGCATTAGCAAGGGATGGAAGAACAGTTATAGCTTCAATTCATCAACCTAGTAGTGAAGTCTTTGAACTATTTGATCAATTGTATTTGCTTTCTGGTGGCAAAACTGTTTATTTTGGTCAAGCTTCAGAAGCATACGAGTTCTTTGCACAAGCTGGATTTCCATGCCCTGCTTTGAGGAACCCCTCTGATCATTTCCTTAGATGCATCAATTCTGATTTTGATAAAGTCAAAGCTACTCTTAAAGGATCCATGAAATTGAGGTTTGAAGGAAGTGATGATCCTCTAGACAAGATCACAACTGCTGAAGCTATAAGAACTCTAATTGATTTCTACCGCACTTCTCAGCACTCTTATGCTGCAAGACAAAAAGTTGATGAAATATCCAAAGTTAAGGGGACAGTGCTTGAAGCTGGAGGAAGTGAAGCTAGTTTCTTGTTGCAATGTTACATATTAACAAAACGTTCATTCATTAACATGTCAAGGGATTTTGGTTACTATTGGCTTAGGCTTGTTATCTACATTGTTGTCACTATTTGCATTGGAACAATTTACTTGAATGTGGGAACTGGCTACAACTCTATTCTGGCTAGAGGTTCATGTGCATCTTTTGTCTTTGGTTTTGTCACCTTCATGTCAATTGGTGGATTTCCTTCCTTTGTTGAAGATATGAAGGTTTTTCAAAGGGAGAGGCTAAATGGACACTATGGTGTGACTGCATTTGTTATAAGCAACACATTATCTGCAACACCATTCTTAATATTAATCACTTTTCTCTCTGGAACAATTTGTTACTTCATGGTTCAACTACATCCTGGCTTTTCCCATTACATTTTCTTTGTGTTGTGTCTCTATGCAAGTGTCACAGTTGTTGAAAGCTTAATGATGGCAATTGCTAGTATTGTTCCTAACTTCCTCATGGGAATTATCATTGGAGCTGGGATTCAAGGTATATTCATGTTGGTCTCTGGCTACTTTAGGCTCCCACATGATATCCCAAAGCCTGTTTGGCGATATCCAATGTCATACATTAGTTTCCACTATTGGGCATTACAGGGTCAATACCAAAACGATCTTAAGGGTTTGATATTCGACAACCAGACACCTGATCTTCCAAAGATACCAGGTGAATACATCTTGGAGTATGTATTCCAAATCGACGTCAAAAGATCAAAATGGATAGATTTAATTGTGATCTTAAGCATGATTATCATATACCGCGTTATTTTCTTCATCATGATTAAAATCAATGAAGATGTTACTCCTTGGGTTAGAGGGTATCTTGCTAGGAGAAGAATGCAACAAAAGAGTGGAGCTCAAAACACAACTATTGCACCTGATGTTCTCACTCAATCTCCATCTTTGAGAGCCTACATTTCTAATCAAAGGTAG 2085 0.376 MEIEASKASLGNDVVVTNLPTLSPLSETLWREKTNTELIGDVSARLTWKDVTVMVTLSNGETQNVLENLTGFAEPGTFTALMGPSGSGKSTLLDALSSRLASNCFLSGTILLNGRKEKLSFGTAAYVTQDDNLIGTLTVRETIWYSARLRLPDKMARSDKKALVESTIVEMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSDDPLDKITTAEAIRTLIDFYRTSQHSYAARQKVDEISKVKGTVLEAGGSEASFLLQCYILTKRSFINMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTAFVISNTLSATPFLILITFLSGTICYFMVQLHPGFSHYIFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHYWALQGQYQNDLKGLIFDNQTPDLPKIPGEYILEYVFQIDVKRSKWIDLIVILSMIIIYRVIFFIMIKINEDVTPWVRGYLARRRMQQKSGAQNTTIAPDVLTQSPSLRAYISNQR 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01472 694 CDD ABCG_EPDR 43 271 - -
Car08g01472 694 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 6 691 - -
Car08g01472 694 Gene3D - 39 284 IPR027417 -
Car08g01472 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 46 283 IPR027417 -
Car08g01472 694 ProSitePatterns ABC transporters family signature. 189 203 IPR017871 GO:0005524
Car08g01472 694 Pfam ABC transporter 67 217 IPR003439 GO:0005524
Car08g01472 694 SMART AAA_5 75 246 IPR003593 -
Car08g01472 694 PANTHER OS04G0528300 PROTEIN 6 691 - -
Car08g01472 694 Pfam ABC-2 type transporter 379 585 IPR013525 GO:0016020|GO:0140359
Car08g01472 694 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 46 289 IPR003439 GO:0005524
Car08g01472 694 Pfam ABC-2 type transporter 246 302 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01472 Car-Chr8 23558151 23566937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01472 64 250 Calmodulin-binding Proteins AT2G36910 32.653 1.15e-11 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01472 08 23558151 23566937 Car08g01472 08 23558151 23566937 ECH