Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car08g01455 | ATGATCCAACCGTTTTTTGGCGGGGAAGAACTGACGGAGGCTGAGATTCGTCTCGAATGGGCACCGTTGATTCCGCGGAGTAGGACGAATTTATTGTGGAGTTTATTTTTGCCTGAGGGATCGAATTTGGATCATGGAGCGGTTAATGTTAGCGGGCCGAATGGAGTGGATTTGTCGGGTTTGGATTATCCGGATACACTTATTTTTGTGGCCGGGGTTGACCCGTTAATTGATTGGCAAAAAAGGTATTATGATTGGTTGAAAAAAAACGGAAAAAATGCTCAATTAATTGAATATCCAAATATGTTTCATACTTTTTATGTTTTTACTGAGTTGCCTGAGACTTCTCAATTGATTTTGCAAGTGAGGGATTTCATCAACAACACTGTCTCTAATTCTAAAGGATGA | 408 | 0.4044 | MIQPFFGGEELTEAEIRLEWAPLIPRSRTNLLWSLFLPEGSNLDHGAVNVSGPNGVDLSGLDYPDTLIFVAGVDPLIDWQKRYYDWLKKNGKNAQLIEYPNMFHTFYVFTELPETSQLILQVRDFINNTVSNSKG | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car08g01455 | 135 | Gene3D | alpha/beta hydrolase | 1 | 134 | IPR029058 | - | |
| Car08g01455 | 135 | Pfam | alpha/beta hydrolase fold | 18 | 107 | IPR013094 | GO:0016787 | |
| Car08g01455 | 135 | PANTHER | ARYLACETAMIDE DEACETYLASE | 1 | 129 | - | - | |
| Car08g01455 | 135 | SUPERFAMILY | alpha/beta-Hydrolases | 2 | 128 | IPR029058 | - | |
| Car08g01455 | 135 | PANTHER | DEACETYLASE, PUTATIVE-RELATED | 1 | 129 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car08g01455 | Car-Chr8 | 23228253 | 23228660 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Car08g01455 | 1 | 128 | Carbohydrate Esterase | AT3G63010 | 32.812 | 6.78e-20 | 82.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car08g01455 | - | - | gmx:100799285 | 195.282 |