Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01446 ATGAAAAAGAATTCTGAACAGGATCGCTTTGGATCTGTATTCAACAAGCTGTTGAGTGAACTTGGGGAACCTGTTGACTTTGAACTTCCAGAATGGATTAAGACGAGGACAACGCAGTACACTCATATAAAGCGCAATATATATCTCACTAAGAAGGCCAAGAAAAAGTTTGATGATGGCATATTCTGTTCCTGCACATCTTCACCTGGATCTACTGGTGTATGTGGTAGAGATTGCCACTGTGCGATGCTTCTGTCTGGCTGTTCTTCAGCCTGCAAATGTGGGATCTCGTGTCTCAACAAAGCTTTTCAGCATCGTCCTGTGAAAAAGCTGAAATTGATTAAGACTGAGAAATGTGGTTTTGGAATTGTGGCGGATGAAGATATCAAGGTTGGGGAGTTTGTCATTGAATATGTTGGTGAAGTCATCGATGATACAACATGCGAACAGAGGCTTTGGAATATGAAAGATCGTGGGGAAACAAACTTTTACTTGTGTGAAATCAATCGAGATATGGTGATAGATGCAACATACAAGGGAAACAAATCAAGATATATCAATCATAGTTGCTGCCCAAATACTGAGATGCAGAAATGGATAATTGATACTGAAACAAGAATTGGCATATTTGCTACTCATGACATTCAGAAGGGCGAGCATCTGACTTATGATTACCAGTTTGTTCAATTTGGTGCAGACCAAGATTGCCACTGTGGTGCTGTTCAGTGTAGGCGTAAGCTGGGTGCTCGACCTACTAAGCCTAAAACGTCTTCCGATGCTGCATTAAAATTAGTTGCATATCAGGTTTGTCAGAATGGAGGCTTGCAAATTGGAAGTTCAAGGGTTGTTGACCAATCAAAATGTTTACACAATTGCATTGATGAAGTTATTATGATAAAAAAACATGGAAATGTGAGATTTGGGATTATTAAGTGGTTTGATGAATTTTCACGAAAACACAAGATCATGTTTGAGGATGGTTGTGTTGAAATTTGTGACATGTCAAAAGAAGATTGGGAACTAGTGAGATTGTGA 1035 0.3932 MKKNSEQDRFGSVFNKLLSELGEPVDFELPEWIKTRTTQYTHIKRNIYLTKKAKKKFDDGIFCSCTSSPGSTGVCGRDCHCAMLLSGCSSACKCGISCLNKAFQHRPVKKLKLIKTEKCGFGIVADEDIKVGEFVIEYVGEVIDDTTCEQRLWNMKDRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDTETRIGIFATHDIQKGEHLTYDYQFVQFGADQDCHCGAVQCRRKLGARPTKPKTSSDAALKLVAYQVCQNGGLQIGSSRVVDQSKCLHNCIDEVIMIKKHGNVRFGIIKWFDEFSRKHKIMFEDGCVEICDMSKEDWELVRL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01446 344 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3 8 342 - -
Car08g01446 344 CDD SET_ASHR3-like 110 248 - -
Car08g01446 344 Gene3D SET domain 23 265 IPR046341 -
Car08g01446 344 ProSiteProfiles SET domain profile. 109 226 IPR001214 GO:0005515
Car08g01446 344 ProSiteProfiles Post-SET domain profile. 232 248 IPR003616 -
Car08g01446 344 SMART set_7 109 232 IPR001214 GO:0005515
Car08g01446 344 Pfam SET domain 120 225 IPR001214 GO:0005515
Car08g01446 344 SMART PostSET_3 232 248 IPR003616 -
Car08g01446 344 SUPERFAMILY SET domain 35 244 IPR046341 -
Car08g01446 344 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 34 286 IPR025787 -
Car08g01446 344 ProSiteProfiles AWS domain profile. 58 107 IPR006560 GO:0005634|GO:0018024
Car08g01446 344 PANTHER SET DOMAIN PROTEINS 8 342 - -
Car08g01446 344 SMART shorttest3 58 108 IPR006560 GO:0005634|GO:0018024
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01446 Car-Chr8 23157464 23166175 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01446 88 244 C2H2 Transcription Factor Family AT2G23740 35.593 9.17e-24 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car08g01446 SET 3.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01446 - - gmx:100808183 609.757