Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01434 ATGGAGTGCAATAAGGATGAGGCCACGAGAGCCAAAGAAATTGCTGAGAGGAAGTTTGTTGCAAAGGACACTTCAGGTGCTAAGAAGTTTGCTTTGAAAGCCCAAAATTTATTTCCTTCCCTTGAGGGTATTTCTCAAATGATAGCAACATTCGACGTGTATATTTCTGCTGAGAATAAAATAAAAGGAGAAGCAGATTGGTATGGCATACTTGGTGTTGACCCCCGTGCTGACGATGATACAGTTAGGAAACATTATAGGAAGCTAGCTCTCATGCTTCACCCCGACAAGAACAAGTCCATCGGAGCTGATGGGGCCTTTAAACTTCTTTCAGAGGCATGGAGTTTACTGTCCGATAAGGCTAGAAGGGCAGCTTATGATGAGAAGATAAACGCAAAAGCACAGAAAGGCTCAACCATTTTCGGTGGTTCATCGGCAAAAGCGGGGCCAAATGGGGCTTACAATAGTAAAAAGAAACCCCCTTCAAGTGCAAGGACTCAGAAGAATACTACTAAGGAAAACACTTCATCTTCTGCTAGTAAATCGAAATCCACATTTTGGACTACTTGCCATCGATGCAAAATGCAATATGAGTATCTCAGAGTTTATCTTAACCTTAAACTTGTGTGTCCAAGCTGCCACGAAGCATTTTTGGCTGTAGAAACTAATCCACCTCCTGCAAGTGGTATTAGACCTGGAACGTCGTGGATTTTTTCACAGAATAAGCAAAAACCGGATCGCCAAGCACCAACTAAAAGCAAATCTAATGCTGGAAAGAACAACGCGGCAGCTCCAAATGTTGGAGCAGGGTCTAACAGTTTCCAGTGGGCTCCATTCTCGAAAACTTCTGGGGTTTCTAATGTAGCTCAAGCTGCAAATGCGGTTAAGCAGGCCTATGATAAGGTGAAGCGAGACCGTGAGGAGGCACAAGCTGCTACCAAAAAGGAAGAGGCGTTAAGGAGGAAGCAGAATGTTTCGAAAAAAGGTTACTTTAATCCAGCTAAGAGAAAGAGGGGTGGTGTGGAGGGAAATGGAGCAGTTGGAGCTTCTAACCTGCATGGTACATGGGGGGTCAGTGGAATCAAGAAAACAAACTGTACTAGAGATCTCTCCCCAGTTGAACTTCAGAATATTCTTGTGGAGAAAGCTAGAAAAGAAATTAGCAAGAAACTCAAGGAGTTTCAGTCAGATACTGTTGATAAATCAGTGGCGAAAGAGAGTGGAGACGGCAGCCAGAAAGCAAACCGGAAAGGAGATATTTTGGTAACAATCTCTGATATCTTTGCTCAAAATAACACCAGGAAGTCAGAAGGTGTAAAGAGTAGATTGCCGTCCGACAAGTCATTTGCAGGTACTACCATCGTTAACTCATGCACGGAAATTTTGGATTCAATGCCAGCAGATGTTCTGGATCCTGATTTCCATGACTTTTACAAAGATCGAACCGAAAGGTCTTTTACTGAAAATCAAGTATGGGCTGCATATGACAGTGGTGATGGAATGCCTCGACGTTATGCTATGATTCACAGAGTGATCTCTCTGAATCCATTCAAGTTGCAGATCAGTTGGCTCTACCCAAATACCAACAACAGCGAACCGGGACCCCTAAATTGGATTGCATTAGGCTTTTCAAAAAGTTGCGGTGATTTCAGAATTGGCAGACGCGAAATCTACAACTCAATCAATTTTTTCTCTCAGAAGGTTAGGTGGAAAAAAGGTAATGATGGAGCCATTTGTGTATATCCCAGAAAAGGAGAGGTTTGGGCCATCTATAGGAATTGGTCTCCTAACTGGAATGACCTAACATCAGATGAGGTGATACACAAGTTTGACATGGTTGAAGTGCTCGAGGATTTTGTTGAAGAACGCGGCGTAACTGTTATTCCGTTGGTCAAGGTAGCTGGGTTCAAGGCAGTTTTTCACCACCACTTAGATTCCAAAGAGATCAAGATCATTCCGAGGGAGGAGATGCTTCGATTCTCTCATCAGGTACCTTCATACTTACTTACTGGCAAAGAAGGTCCTAATGCTCCAAAGGGTTGCAGGGTGCTGGACCCGGCTGCTACTCCATGTGAACTTCTCGTTGTAATAAAAGTTGTGGAGGAGGAAAACATGGCCGACGTCATGGATAGTGTAACGAAAGAAACTAATTGCGAGGAAATGGACATTGATAGGAGAAAACTTGGCGGAGCAAAGGAGGGAAAGATGAAAGTTATCCATGTAATAGAATCTTCAGACGAAGACAGAGGGAAGAAGATATGCAGAGGCTTGTAG 2274 0.4345 MECNKDEATRAKEIAERKFVAKDTSGAKKFALKAQNLFPSLEGISQMIATFDVYISAENKIKGEADWYGILGVDPRADDDTVRKHYRKLALMLHPDKNKSIGADGAFKLLSEAWSLLSDKARRAAYDEKINAKAQKGSTIFGGSSAKAGPNGAYNSKKKPPSSARTQKNTTKENTSSSASKSKSTFWTTCHRCKMQYEYLRVYLNLKLVCPSCHEAFLAVETNPPPASGIRPGTSWIFSQNKQKPDRQAPTKSKSNAGKNNAAAPNVGAGSNSFQWAPFSKTSGVSNVAQAANAVKQAYDKVKRDREEAQAATKKEEALRRKQNVSKKGYFNPAKRKRGGVEGNGAVGASNLHGTWGVSGIKKTNCTRDLSPVELQNILVEKARKEISKKLKEFQSDTVDKSVAKESGDGSQKANRKGDILVTISDIFAQNNTRKSEGVKSRLPSDKSFAGTTIVNSCTEILDSMPADVLDPDFHDFYKDRTERSFTENQVWAAYDSGDGMPRRYAMIHRVISLNPFKLQISWLYPNTNNSEPGPLNWIALGFSKSCGDFRIGRREIYNSINFFSQKVRWKKGNDGAICVYPRKGEVWAIYRNWSPNWNDLTSDEVIHKFDMVEVLEDFVEERGVTVIPLVKVAGFKAVFHHHLDSKEIKIIPREEMLRFSHQVPSYLLTGKEGPNAPKGCRVLDPAATPCELLVVIKVVEEENMADVMDSVTKETNCEEMDIDRRKLGGAKEGKMKVIHVIESSDEDRGKKICRGL 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01434 757 Pfam DnaJ domain 66 127 IPR001623 -
Car08g01434 757 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Car08g01434 757 MobiDBLite consensus disorder prediction 223 270 - -
Car08g01434 757 Pfam Domain of unknown function (DUF3444) 467 673 IPR024593 -
Car08g01434 757 PRINTS DnaJ domain signature 68 86 IPR001623 -
Car08g01434 757 PRINTS DnaJ domain signature 86 101 IPR001623 -
Car08g01434 757 PRINTS DnaJ domain signature 102 122 IPR001623 -
Car08g01434 757 PANTHER BNAC03G44070D PROTEIN 1 694 - -
Car08g01434 757 SMART dnaj_3 65 122 IPR001623 -
Car08g01434 757 SUPERFAMILY Chaperone J-domain 58 126 IPR036869 -
Car08g01434 757 MobiDBLite consensus disorder prediction 233 270 - -
Car08g01434 757 PANTHER BNAA04G14940D PROTEIN 1 694 - -
Car08g01434 757 CDD DnaJ 66 119 IPR001623 -
Car08g01434 757 Gene3D DnaJ domain 63 187 IPR036869 -
Car08g01434 757 MobiDBLite consensus disorder prediction 141 181 - -
Car08g01434 757 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Car08g01434 757 Coils Coil 292 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01434 Car-Chr8 22997961 23000234 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01434 4 339 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.612 2.05e-35 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01434 - - lja:Lj2g3v0520120.1 971.844