Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01427 ATGGCTTCTATTGCTGCTTCAACTGCAGCTGCTTCACTTGGCATGTCAGAAATGCTTGGAAACCCTATCAACTTCAGTGGTGCTACAAGGTCTGCTCCTTCTCCTTCTACACCTTCTACCTTCAAAACTGTTGCTCTTTTCTCTAAGAAGAAGGCTGCACCACCGCCGAAGCAGAAAGTGTCTACTCCGGCCAACGATGAGCTCGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCAGATGGTCTCTTGGACAGATCTGAGATCCCTGAGTACTTGACTGGAGAAGTCCCTGGAGACTATGGTTATGACCCTTTTGGTCTAAGCAAGAAGCCCGAAGACTTCGCGAAATATCAGGCATATGAGGTGATTCATGCTAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTCAACAAATATGGAGCTAACTGTGGTCCTGAAGCTGTTTGGTTCAAGACAGGAGCTCTTCTTCTTGATGGTGGTACATTGAACTACTTTGGAAAACCAATCCCAATCAACCttattgttgctgttgttgctgaggttgttcttttgGGAGGTGCAGAGTACTACAGAATTATCAATGGACTGGAATTGGAAGACAAGCTTCATCCAGGTGGTCCATTTGATCCATTGGGACTAGCAAATGATCCAGACCAAGCTGCAATTCTAAAGGTGAAGGAAATCAAGAATGGAAGACTTGCAATGTTTGCCATGCTTGGTTTCTTCATCCAAGCTTATGTGACAGGAGAAGGTCCTGTTGAGAATATTGCTAAACATCTCAGTGACCCTTTTGGAAACAACTTGCTTACTGTCATTGCTGGAAATGTTGAGAGGGCTCCAACTCTTTGA 870 0.4391 MASIAASTAAASLGMSEMLGNPINFSGATRSAPSPSTPSTFKTVALFSKKKAAPPPKQKVSTPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYEVIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVVAEVVLLGGAEYYRIINGLELEDKLHPGGPFDPLGLANDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENIAKHLSDPFGNNLLTVIAGNVERAPTL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01427 289 Pfam Chlorophyll A-B binding protein 91 252 IPR022796 -
Car08g01427 289 SUPERFAMILY Chlorophyll a-b binding protein 71 279 - -
Car08g01427 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 289 IPR001344 GO:0009765|GO:0016020
Car08g01427 289 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 289 - -
Car08g01427 289 Gene3D Chlorophyll a/b binding protein domain 78 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01427 Car-Chr8 22919080 22922922 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01427 11 289 Chloroplast and Mitochondria Gene Families AT4G10340 83.214 1.57e-154 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01427 K08916 - gmx:100789786 513.842