Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01419 ATGGAAGAAAGAGAGATTTTTGGTTCTGGGCATGTTGTTAAGGTTAACGAGGTCCCACAGGGTTTCAATTTGGGTCAAAATTCTTTGAATTTTTCTGGGTCCACCGGAGAGTTTCCGGTGCCGTCTCCGGCAAGTGTGCCGGCTGCAGGTGGTACTGAGGTAGTAAAGAAGAAGAGGGGTAGGCCTAGGAAGTCTGAATCCGGAAGTAAACCGGCGCTTTCGCCTATGCCGATTTCGGCCTCTATTCCGTTGACAGGAGATTTCTCTTGCTGGAACAATGGTGGTGGGAAGTCTTTTGAAGGCACTAAGAAGCCTTTTAAGTTGAATGATTTTGATGAAGATGATGGAACACAAACCTTTGGTTCCCATTTCAAAACTCATGTGCTTACCGTAAATTCGGGAGAGGATGTCTTGATGAAAATAATGTCTCTCTCTCAACGAGAATATCATGCTATATCCATTCTCTCTGCGAACGGCACAATTTCAAATGTCACACTTCGCCAGTCAGAAGCTTGTGGTGGTACATCGACGTATGAGGGAATGTTCGAGATTCTTTCCTTGTGCGGCTCATTTGTGCCAACTGAGAATGGATTGACAAAGAGTAGAGTTGGTCGGATGAGTGTCTCATTGGCGGGTCCAGATGGTAGTGTTTTGGGGGGTGGACTCGCGGGTTTGCTGGTAGCTGCTGGTCCTGTGCAGGTTGTGGTAGGGAGTTTTCTTCCTGAGCAGCCGAAACAGAAGAGGCAGAGACTCGATCACACGTCACCAACGTCCCTTCTTATATCATCACACGTCAACAATCCTGTTTCAGTTGAAGAATTGAAAACCGATCTCGGTGGAATGAAGCCTTTCATGACCCCAGCCGGGTTTGAAGTGAACAACAACTTTGCTTCTTTCGGAAACGGACAAGGCTCTGGAAACTCATCGTCCGCAGACGATGAGAACGTCTAA 951 0.4721 MEEREIFGSGHVVKVNEVPQGFNLGQNSLNFSGSTGEFPVPSPASVPAAGGTEVVKKKRGRPRKSESGSKPALSPMPISASIPLTGDFSCWNNGGGKSFEGTKKPFKLNDFDEDDGTQTFGSHFKTHVLTVNSGEDVLMKIMSLSQREYHAISILSANGTISNVTLRQSEACGGTSTYEGMFEILSLCGSFVPTENGLTKSRVGRMSVSLAGPDGSVLGGGLAGLLVAAGPVQVVVGSFLPEQPKQKRQRLDHTSPTSLLISSHVNNPVSVEELKTDLGGMKPFMTPAGFEVNNNFASFGNGQGSGNSSSADDENV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01419 316 MobiDBLite consensus disorder prediction 24 39 - -
Car08g01419 316 Gene3D - 124 267 - -
Car08g01419 316 ProSiteProfiles PPC domain profile profile. 120 263 IPR005175 -
Car08g01419 316 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 308 IPR039605 GO:0003680
Car08g01419 316 Pfam Plants and Prokaryotes Conserved (PCC) domain 125 239 IPR005175 -
Car08g01419 316 SUPERFAMILY AF0104/ALDC/Ptd012-like 122 246 - -
Car08g01419 316 MobiDBLite consensus disorder prediction 24 79 - -
Car08g01419 316 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 7 308 - -
Car08g01419 316 CDD DUF296 125 216 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01419 Car-Chr8 22773614 22778244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01419 42 251 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 51.724 4.43e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01419 - - cam:101510032 559.681