Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01391 TTTGAATTATTCAGATTTTATGGCGACAACGACGAAACTCAGCCGCCTAGCACAAAGCGAAAAACAATTGTGTTCATTGTTGTGCCTATAATTATTTTGGTGATGCTCTTTTCTATTGGATACTATTTGCTAAAGAGAATGGGAATAAAGAGTAGAAGGACTATTCTTCGAGAAAATTTTGGTGAAGAAAGTGTCACTTTAGAACCATTGCAATTCGATTGGGCAGTAATTGAAGAAGCAACCAACAATTTTTCTAAAGACAATTACATTGGCAAAGGCGGTTTTGGAGAGGTATACAAGGGTATCCTTTTTTATGGACAAGAAATAGCTGTAAAGAGACTTTCAAGATGTTCGAAGCAAGGCGTAGAGGAATTCAAGAATGAAGTTTTATTGATAGCTAAACTTCAACATAGAAATTTGGTGACATTTATTGGTTTTTGCCTTGAAGAACAAGAGAAAATACTTATTTATGAATATGTGACAAACAAAAGTCTTGATTACTTTTTATTTGATTCTCAACGACAAAAGTTGTTAAGTTGGGTTGAACGCTTTAACATCATAGGAGGAATTGCTCGAGGAATTCTTTATTTACATGAACATTCTCGACTCAAAGTTATACATCGTGATTTCAAACCTAGTAATATTTTATTAGATGAAAATATGATTCCAAAAATTGCAGATTTTGGTTTGGCACGAATTGTTGAAATAAGTCAAGACCAAGGAAGTACAAATAGAATTGTAGGAACATATGGTTATATGTCTTCAGAATATGCAATGCTTGGACAATTTTCTGAAAAATCAGACAATTTTAGCTTTGGAGTCATGCTTTTAGAGATTATTACCGGAAAGAAGAATGCAAGTTCATACACACCACAACGTTTTGTTGATGGACTCTTGAACAATTTATTCAATTGA 915 0.3311 FELFRFYGDNDETQPPSTKRKTIVFIVVPIIILVMLFSIGYYLLKRMGIKSRRTILRENFGEESVTLEPLQFDWAVIEEATNNFSKDNYIGKGGFGEVYKGILFYGQEIAVKRLSRCSKQGVEEFKNEVLLIAKLQHRNLVTFIGFCLEEQEKILIYEYVTNKSLDYFLFDSQRQKLLSWVERFNIIGGIARGILYLHEHSRLKVIHRDFKPSNILLDENMIPKIADFGLARIVEISQDQGSTNRIVGTYGYMSSEYAMLGQFSEKSDNFSFGVMLLEIITGKKNASSYTPQRFVDGLLNNLFN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01391 304 Gene3D Transferase(Phosphotransferase) domain 1 160 303 - -
Car08g01391 304 SUPERFAMILY Protein kinase-like (PK-like) 64 295 IPR011009 -
Car08g01391 304 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 13 301 - -
Car08g01391 304 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 301 - -
Car08g01391 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Car08g01391 304 ProSitePatterns Protein kinases ATP-binding region signature. 90 112 IPR017441 GO:0005524
Car08g01391 304 Pfam Protein tyrosine and serine/threonine kinase 87 296 IPR001245 GO:0004672|GO:0006468
Car08g01391 304 Gene3D Phosphorylase Kinase; domain 1 48 159 - -
Car08g01391 304 ProSiteProfiles Protein kinase domain profile. 84 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01391 Car-Chr8 22148464 22184865 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01391 11 289 Receptor kinase-like Gene Family AT4G23190 56.098 3.82e-105 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car08g01391 PK_Tyr_Ser-Thr 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01391 - - cam:101493835 513.842