Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01388 ATGACTAATTTCCAAAACATTCTTTACCTCTTCACCCTTGTTATCTTTTTCAAAACTTTTGCATCCACTAATTCATGGGATGACCCTTTTTTCATATACCAATATTGCTCAAGCAATAGAACCACATCAAATACATCCTTCCAGTTAAACCTTCACACCCTTCTATCTTCCTTATCATCCAAAGCCACAACCAACACAAATACAAAATTCTACAACACAACTTTCATTGGAAACAACCCTTTTGATACAATCTATGGCATGTTCATGTGTAGAGGTGATGTTCCCTCTCAACTTTGTCAACAATGTATAGTAAATGCAACACAAAGACTTTCCTTGCAATGTTCTTTGTCAAAAGAAGGTGTTGTTTGGTATGAGGAATGCATGGCTTGGTATTCAACAACCTTTATCTTCTCAACTATGGCAACAACAACCCCAAATATTTACTTGTTGAACACTGACAAAGTCTCAAACATAAAAAATTTCATGAGTTTATTGTTTTCTACAATGAACAAAACTGCAAATGAAGCATCTTTTGGTGACACAAAATTTGCATCAAATGAAAATACTATATCAAAATTTCAAACCCTTTATTGTTTAGCTCAATGCACACCAAATTTGTCACCACATGATTGTAGAACATGTCTAAGTGGATTGATAGATGAACTTCCAATTTGTTGTGAAGGAAGAATTGGAGGTAGAGTTTTAAATCCAAGTTGTAATATTAGGTATGAATTTTATCCTTTTTATCTTTCAACTATTGATTCATCAAAGCCTATATCACAAATTCTATTTCCTCAAACAAAAAATTCAAGTGATGATTCAATGTTTTTAGAACATCCTTTTTACCTTTCACACAATTGTTCTTTTAGTAACAAAACCATTACTTTTAACAACACTTTCAAAGTTCACCTCACTACCCTGTTATCTTACTTGTCTTCTAATGCCACTAAAAGCTTATTTTATAAAGTTGATGTGGCTAATAAAGTTTTTGGCCTCTTCATGTGTCGTGGTGATGTTGCTTTTCCTTTATGTGAACAATGTGTGCAAAATGCAACATATCAAATAAAATCAAAGTGTCATTCATTTCAAGAGGCTATAATTTGGTATAGTCATTGTATGATTAGATATTCATATTGGAATTTCTTTTCCATAGTGGACAAAAGTCATGTGTTTTATGAGATGAATGTGACTAGTGACTCTAGTCCAAATAAAGAGAGAAACTTGTTCAATTTTGAAATATCAAATGCACTATCAAAAGTGGCAATTATGGCAAGGGATAGTGGTGAGAGATTTGGAACAAAATCAATCAAATTGAATGATTTACAAACACTTTATACACTCGGTCAATGTACAAAAGATTTGACTAGTGATGATTGCAAAGGTTGTTTGGGAGATATTATGGGAAATGGAATTGCTTGGCCTTATTTGGGAAGTGTAGGTGGAAGAGTTCTCTATCCAAGCTGCAATTTGAGGTTTGAATTGTTCCAATTTTACAAAGAGAATGACAAAGCTAGCAAACCAATAATTAATCATTCTACATCAGGAAAAAGGAGAAACTGGTCGCGAACAATTATCTTGATTGTTGTGCTGACACTTGTTTTAGTGATACTCTTCTTTGTTGGTTGTTATTTACTAAAGAGACAAGCAAGAAGGAATTTTAAAACTATTCTCGGAGAAAACTTTGGTCATGAAGGTGCAGCTTTAGAGCCATTACAATTTCATTTAGCTTTAATTGAAGCATCAACCAACAACTTTTCAAATGAAAATTACATTGGCAAGGGTGGATTTGGAGAAGTTTACAAAGGCATACTTTTGGATGGAAGACAGATAGCGGTAAAAAGACTCTCGAAAAGCTCTATGCAAGGTGCAGATGAGTTCAAGAATGAAGTTTTGTTGATAGCCAAACTTCAACATAGAAATCTAGTGGCGTTCATTGGTTTTTGCCTTGAAGAACAAGAGAAAATACTTATCTATGAATACGTGCCGAATAAAAGCCTTGATCACTTTTTATTTGGCAAGCAAGGTCCAATGTTTTTAAGTTGGTTCCAACGATACAACATTATAAGAGGAATTGCTCAAGGAATTCTTTATTTACATGAGCATTCTCGACTTAAAGTCATTCATCGTGATCTTAAACCTAGTAATATTCTATTAGATGAAAATATGATTCCAAAAATATCTGATTTTGGTCTTGCTAGAATTGTTGAATTAAACCAAGATAAGGAAAATACAAATAGAATCGTTGGAACGTTGGGCTATATGTCTCCAGAATATGCAATGTTCGGACAATTTTCTGACAAATCAGATGTTTATAGTTTTGGAGTCATGGTTTTAGAAATTATTACTGCAAAGAAGAATGTATGTTCTTATGAATCAACTATCGGTGATAGCCTCCTGAAATATGTTTGGAGACAATGGAGGGATCAAATACCTTTAAGCATACTAGACCCAAATATTAAAGAAAGATTTTCTGAAATTGAAATAATTAAATGCATTCAAATTGGTTTATTGTGTGTTCAACAACTCCCTGAAACTAGACCATCAATGGCAACCATTGTTTCATATCTTAACAATGACTTTATTGAATTGCCAACTCCTAAGGAATCTGCATTTTTCTTCCATGGCCAAATGGATGCAATAGCTATTCAACAAGATTCAAGTTCTAGTCATTATATCAATAACACTACAACTTGTTCGATCAATGACTTGTCTATGTCTCAATTTCTTCCTCGATAG 2736 0.3322 MTNFQNILYLFTLVIFFKTFASTNSWDDPFFIYQYCSSNRTTSNTSFQLNLHTLLSSLSSKATTNTNTKFYNTTFIGNNPFDTIYGMFMCRGDVPSQLCQQCIVNATQRLSLQCSLSKEGVVWYEECMAWYSTTFIFSTMATTTPNIYLLNTDKVSNIKNFMSLLFSTMNKTANEASFGDTKFASNENTISKFQTLYCLAQCTPNLSPHDCRTCLSGLIDELPICCEGRIGGRVLNPSCNIRYEFYPFYLSTIDSSKPISQILFPQTKNSSDDSMFLEHPFYLSHNCSFSNKTITFNNTFKVHLTTLLSYLSSNATKSLFYKVDVANKVFGLFMCRGDVAFPLCEQCVQNATYQIKSKCHSFQEAIIWYSHCMIRYSYWNFFSIVDKSHVFYEMNVTSDSSPNKERNLFNFEISNALSKVAIMARDSGERFGTKSIKLNDLQTLYTLGQCTKDLTSDDCKGCLGDIMGNGIAWPYLGSVGGRVLYPSCNLRFELFQFYKENDKASKPIINHSTSGKRRNWSRTIILIVVLTLVLVILFFVGCYLLKRQARRNFKTILGENFGHEGAALEPLQFHLALIEASTNNFSNENYIGKGGFGEVYKGILLDGRQIAVKRLSKSSMQGADEFKNEVLLIAKLQHRNLVAFIGFCLEEQEKILIYEYVPNKSLDHFLFGKQGPMFLSWFQRYNIIRGIAQGILYLHEHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVELNQDKENTNRIVGTLGYMSPEYAMFGQFSDKSDVYSFGVMVLEIITAKKNVCSYESTIGDSLLKYVWRQWRDQIPLSILDPNIKERFSEIEIIKCIQIGLLCVQQLPETRPSMATIVSYLNNDFIELPTPKESAFFFHGQMDAIAIQQDSSSSHYINNTTTCSINDLSMSQFLPR 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01388 911 ProSiteProfiles Gnk2-homologous domain profile. 29 136 IPR002902 -
Car08g01388 911 Gene3D Phosphorylase Kinase; domain 1 555 660 - -
Car08g01388 911 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 275 502 - -
Car08g01388 911 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 17 257 - -
Car08g01388 911 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 513 898 - -
Car08g01388 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 706 718 IPR008271 GO:0004672|GO:0006468
Car08g01388 911 SUPERFAMILY Protein kinase-like (PK-like) 569 889 IPR011009 -
Car08g01388 911 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Car08g01388 911 SMART serkin_6 585 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01388 911 ProSiteProfiles Gnk2-homologous domain profile. 391 497 IPR002902 -
Car08g01388 911 ProSitePatterns Protein kinases ATP-binding region signature. 591 613 IPR017441 GO:0005524
Car08g01388 911 Pfam Salt stress response/antifungal 36 133 IPR002902 -
Car08g01388 911 Pfam Salt stress response/antifungal 404 493 IPR002902 -
Car08g01388 911 Pfam Salt stress response/antifungal 160 245 IPR002902 -
Car08g01388 911 Pfam Salt stress response/antifungal 287 377 IPR002902 -
Car08g01388 911 ProSiteProfiles Gnk2-homologous domain profile. 282 381 IPR002902 -
Car08g01388 911 CDD STKc_IRAK 591 858 - -
Car08g01388 911 ProSiteProfiles Protein kinase domain profile. 585 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01388 911 Pfam Protein kinase domain 586 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01388 911 Gene3D Transferase(Phosphotransferase) domain 1 661 863 - -
Car08g01388 911 Gene3D - 389 497 IPR038408 -
Car08g01388 911 Gene3D - 281 381 IPR038408 -
Car08g01388 911 Gene3D - 28 135 IPR038408 -
Car08g01388 911 Gene3D - 143 248 IPR038408 -
Car08g01388 911 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 513 898 - -
Car08g01388 911 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 275 502 - -
Car08g01388 911 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01388 Car-Chr8 22128204 22136177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01388 280 911 Receptor kinase-like Gene Family AT4G05200 43.664 1.85e-172 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car08g01388 Pkinase 9.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01388 - - gmx:100806048 1220.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01388 08 22128204 22136177 Car08g01388 08 22128204 22136177 ECH