Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01387 ATGTGTCGTGGTGATGTTTCTTTTCCTTTATGTGAACAATGTGTGCAAAATGCAACATATCAAATAACATCAAAGTGTCACTCATTTCAAGAGGCTATAATTTGGTATAGTCATTGTATGATTAGATATTCATATTGGAATTTCTTTTCCATAGTGGACAAAAATCATGTGTTTTATGAGATGAATGTGACTAGTGACTCTAGTCCAAATAAAAAGAGAAACTTGTTCAACTTTGTAGTATCAAATGCACTATCAAAAGTGGCAATTGTGGCAGGGGATAGTGATGAGAGATATGGAACAAAATCATTGAAATTAAATGATTTACAAATATTTTATACACTTGGTCAATGTACACAAGATTTGTCAAGTGATGATTGCAAGGGTTGTTTGGGAGATGTTATTGGAAATGCAATTCCTTGGCCTTCATTGGGAAGTGTAGGTGGAAGTGTTTTATATCCTAGTTGCAATTTGAGGTTTGAGTTGTTCCAATTTTACAAGGAGGGTGATAAAGCTACTTTACCAATAATTAAATATTCTCCATCAGAGAAAATAAGAAATTGGTGGCAAACAATTAGCTTGATTGTGGTATCAATTATGATCTTCTTCTTTGTTGGCTGCTATTTGCTAAAGAGAAAAGCAAGAAAGAAATTTAAGGCTATCCTCAAAGAAAATTTTGGTGATGAAGGTGCAACTTTAGAGCCTTTACAATTTGATTTAGTTGTAATTGAAGAAGCAACTAACAACTTTTCAAATGAAAATTATATTGGCAAAGGTGGATTTGGAAATGTTTACAAGGGCATACTTTTAGATGGACGACAAATAGCTGTAAAAAGACTCTCAATAAGCTCTAGCCAAGGGGGGACTGAGTTCAAGAATGAAGTTTTGCTAATAGCCAAGCTTCAACATAGAAATCTAGTGGCGTTCATCGGTTTCTGCCTTGAAGAACAAGAGAAAATACTTATTTATGAATATGTGACAAACAATAGTCTTGATCACTTTTTATTTGACTTTCGAAGACCGAAGTTCTTAAGTTGGTTCGAACGTTCCAATATTATAAGAGGAATTGCTCAAGGAATACTTTATTTACATGAATATTCTCGACTCAAAGTTATTCATCGTGACCTCAAACCGAATAATATTTTATTAGATGAAAATATGAATCCAAGAATACCAGACTTTGGTCTTGCTAGAATTGTTGAATTAAACCAAGACAAAGAAAATACAAATAGAATCGTCGGAACATTAGGCTATATGTGTCCAGAATATGCAATGCTCGGGCAATTTTCTGAAAAATCTGATGTTTATAGTTTTGGAGTCATGGTTTTAGAAATTATTACTGGAAATAAGAATGTAACTTCTTATGAATCATGTGTTGGTCATAGCCTCTTGAATTATGTTTGGAGACAATGGAGAAATCAAATACCTTTGAGCATATTAGACCCAAATATTAAAGGAAGTTATTGTGAAATTGAAGTCATTAAATGCATTCAAATTGGTTTATTGTGTGTTCAGACCAACAATGCTAAAAATTGTTTCATATCTCAACAATCACTTCATTGA 1560 0.3276 MCRGDVSFPLCEQCVQNATYQITSKCHSFQEAIIWYSHCMIRYSYWNFFSIVDKNHVFYEMNVTSDSSPNKKRNLFNFVVSNALSKVAIVAGDSDERYGTKSLKLNDLQIFYTLGQCTQDLSSDDCKGCLGDVIGNAIPWPSLGSVGGSVLYPSCNLRFELFQFYKEGDKATLPIIKYSPSEKIRNWWQTISLIVVSIMIFFFVGCYLLKRKARKKFKAILKENFGDEGATLEPLQFDLVVIEEATNNFSNENYIGKGGFGNVYKGILLDGRQIAVKRLSISSSQGGTEFKNEVLLIAKLQHRNLVAFIGFCLEEQEKILIYEYVTNNSLDHFLFDFRRPKFLSWFERSNIIRGIAQGILYLHEYSRLKVIHRDLKPNNILLDENMNPRIPDFGLARIVELNQDKENTNRIVGTLGYMCPEYAMLGQFSEKSDVYSFGVMVLEIITGNKNVTSYESCVGHSLLNYVWRQWRNQIPLSILDPNIKGSYCEIEVIKCIQIGLLCVQTNNAKNCFISQQSLH 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01387 519 ProSiteProfiles Gnk2-homologous domain profile. 1 48 IPR002902 -
Car08g01387 519 Gene3D Phosphorylase Kinase; domain 1 211 324 - -
Car08g01387 519 Gene3D Transferase(Phosphotransferase) domain 1 325 517 - -
Car08g01387 519 Gene3D - 1 48 IPR038408 -
Car08g01387 519 Gene3D - 56 164 IPR038408 -
Car08g01387 519 ProSiteProfiles Gnk2-homologous domain profile. 58 164 IPR002902 -
Car08g01387 519 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 169 - -
Car08g01387 519 SUPERFAMILY Protein kinase-like (PK-like) 233 508 IPR011009 -
Car08g01387 519 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 180 506 - -
Car08g01387 519 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 169 - -
Car08g01387 519 SMART serkin_6 249 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01387 519 Pfam Salt stress response/antifungal 73 160 IPR002902 -
Car08g01387 519 Pfam Salt stress response/antifungal 1 44 IPR002902 -
Car08g01387 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 370 382 IPR008271 GO:0004672|GO:0006468
Car08g01387 519 Pfam Protein kinase domain 250 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01387 519 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 180 506 - -
Car08g01387 519 ProSitePatterns Protein kinases ATP-binding region signature. 255 277 IPR017441 GO:0005524
Car08g01387 519 ProSiteProfiles Protein kinase domain profile. 249 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01387 519 CDD STKc_IRAK 255 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01387 Car-Chr8 22119552 22122385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01387 1 518 Receptor kinase-like Gene Family AT4G23150 44.528 5.34e-147 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car08g01387 Pkinase 3.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01387 - - gmx:100806048 744.191