Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01383 ATGCTTTCTCGCAAACTCTTTCAATCTCAGCTGTCCACGTCAGCATCACATCTTCCCCCACCCCAACCTCACCACCACAACCACATCTTAATTCCTCTCCTCGCCGTCACCGCCGCCATACTAACTctcctcctcctcctcaccttcctcTACCGCCGCACCAGAAAAAAACGCACCGCCCCATTCTCCTTCACCACCGAAAACCCTCCCCACCGTTTCTCATACTCCCTCCTCCGCCGCGCCACCAACTCCTTCTCAACTCCCCTCGGCCATGGCGGCTTCGGCACCGTCTTCTCCGGGAAACTCCCTTCTCCTTATTCAAAACTCATCGCTGTTAAGCTAATGGACACTTCTTCTCTCCAAGGCGAACGCGAATTTCACAACGAACTCTTCTTCTCTTCAAGGCTTCGTTCTCTTCATATAATTCCACCGTTAGGGTTTTCGTCTGATCCTAAACGACGTCGTTTTCTACTCGTTTACCCTCTCATGCAAAACGGCAATCTTCAAGACGCGCTTTTGAAACGTAAGTGCTCTGAACTTTTTTATTGGAGAAAAAGATTTGAAATTGTTTTGGATATAGCTAAGGGACTTTGTTATCTTCATTGTTCTGATCCTCCTGTTATACATGGAGATATTAAACCTAGTAATATTCTTTTGGATTGTGATTTTGTTGCTAAAATCGGCGATTTCGGACTTGCTCGGTTGAAATCGGAGCCAgttaaggttgatgttgagcttttggatgttgatactgatgatgaAATGAAGAAAAGAAATGATGAATTGGATTGTGGTGGTGTTGGGGTTGTTATTGATGATTGTGGATCCATGGAGAGTGTGCATACCGGGTTTTTTGAAGAGGGGAATTTGGGTGTGGAGCAATCTCCGGTAGCTTCGCCGGAAACTGTCGAGATGAGAATGACTATGTCGATGGCGGAGGCAGAAGCGGAAGCGGAAGCGTTGCCGGGGTTTGAGAAGGGTAGTGTGAAGAGTGAGAAGGGTGTTGTTGTTGAGGATGTTAAGAGAAATGGGAAAGGGTTATCGAGTAATTCGGTTAGGGATTGGTGGTGGAAAGAGGATAATGAGATTGCGGGTTTGACGCCTGTTGGTGAAGGTAAGAAGGTGAAGGATTATGTGATGGATTGGATTGGAAGGGAAGTGAAAAGTGAAAAGGGTGAATTGGTGAGAGGGAAGATAGAGGTGAAAGAGAATAAGAAGGAGAAGAAGAATAGGAAGCAGAAGTTGGAATGGTGGGAATCGATGGATGAGGAAAATGTTGTTGGAGTGACGAGGAAGGAGAAGAGAAAGTCGGTGAGGGAATGGTGGAAGGAGGAGTATTGTGAAGAAGTTGCAAAAGGGAAAAAGAAGAAGAATAAGAAGAAAAAGGGTGTAGAGAGTGATGATGTCATTAGCAATGGTGAAAATTGGTGGATGAGTGATGATGCATTATACGGGGAAAGAAAGAAAGGAACAAGCAGAAATAGAAATAATCGCGGTAGTGTGGATTGGTGGTTAGATGGGTTTAGTGGCGAGTTATGGAGAGCACGTCGGAATAGCTTCGATTCAGCTAGTGGAGAGATTCCGAAGAGTGGTGGTGTGAGTAGTACTCCAAGTATGAGGGGAACTGTTTGTTATGTTGCTCCTGAGTATGGCTTTGGCGAAGACGTATCAGAGAAGTGTGATGTTTATAGCTTTGGTATCTTGTTGCTTGTTATCATTTCTGGGAGACGCCCACTTCAAGTGACCGGTTCACCGTTATCGGAGTTTCAAAGAGCTAATCTTTTGTCGTGGGCACGCCATTGTGCGAGAAATGGGAAGCTCATCGAGCTGGTTGATGAATCTATTCAGTCTTTGAACAAGGAGCAAGCTCTGATCTGCATCAAAGTGGCTTTGCTTTGTTTGCTTAAGTCACCTGCTCGGCGTCCTTCAATGAAAGAGGTTGTCGGAATGCTTAGTGGGGAGCTCGAGCCGCCTCAATTGCCTGTCGAGTACTCACCTTCGACCCCTTCACGCTTCCCATTCAAATCTAGGAAGAAAGCTCGCACATCAATACATCATATAAAACTTTTCTTAAAAAGAAAAGGGAATGAGAAAGAAAGATAG 2103 0.4398 MLSRKLFQSQLSTSASHLPPPQPHHHNHILIPLLAVTAAILTLLLLLTFLYRRTRKKRTAPFSFTTENPPHRFSYSLLRRATNSFSTPLGHGGFGTVFSGKLPSPYSKLIAVKLMDTSSLQGEREFHNELFFSSRLRSLHIIPPLGFSSDPKRRRFLLVYPLMQNGNLQDALLKRKCSELFYWRKRFEIVLDIAKGLCYLHCSDPPVIHGDIKPSNILLDCDFVAKIGDFGLARLKSEPVKVDVELLDVDTDDEMKKRNDELDCGGVGVVIDDCGSMESVHTGFFEEGNLGVEQSPVASPETVEMRMTMSMAEAEAEAEALPGFEKGSVKSEKGVVVEDVKRNGKGLSSNSVRDWWWKEDNEIAGLTPVGEGKKVKDYVMDWIGREVKSEKGELVRGKIEVKENKKEKKNRKQKLEWWESMDEENVVGVTRKEKRKSVREWWKEEYCEEVAKGKKKKNKKKKGVESDDVISNGENWWMSDDALYGERKKGTSRNRNNRGSVDWWLDGFSGELWRARRNSFDSASGEIPKSGGVSSTPSMRGTVCYVAPEYGFGEDVSEKCDVYSFGILLLVIISGRRPLQVTGSPLSEFQRANLLSWARHCARNGKLIELVDESIQSLNKEQALICIKVALLCLLKSPARRPSMKEVVGMLSGELEPPQLPVEYSPSTPSRFPFKSRKKARTSIHHIKLFLKRKGNEKER 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01383 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Car08g01383 700 SUPERFAMILY Protein kinase-like (PK-like) 61 672 IPR011009 -
Car08g01383 700 SMART serkin_6 83 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01383 700 Gene3D Phosphorylase Kinase; domain 1 57 161 - -
Car08g01383 700 ProSitePatterns Protein kinases ATP-binding region signature. 89 113 IPR017441 GO:0005524
Car08g01383 700 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 12 681 - -
Car08g01383 700 Pfam Protein tyrosine and serine/threonine kinase 537 650 IPR001245 GO:0004672|GO:0006468
Car08g01383 700 Pfam Protein tyrosine and serine/threonine kinase 86 236 IPR001245 GO:0004672|GO:0006468
Car08g01383 700 PANTHER OS07G0586332 PROTEIN 12 681 IPR044576 -
Car08g01383 700 ProSiteProfiles Protein kinase domain profile. 83 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01383 700 Gene3D Transferase(Phosphotransferase) domain 1 163 259 - -
Car08g01383 700 Gene3D Transferase(Phosphotransferase) domain 1 517 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01383 Car-Chr8 22074149 22077542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01383 536 658 Receptor kinase-like Gene Family AT2G43700 32.258 8.79e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Car08g01383 PK_Tyr_Ser-Thr 9.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01383 - - lja:Lj2g3v0473820.1 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01383 08 22074149 22077542 Car04g01259 04 12889606 12891883 PCT