Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01382 ATGATGGATCATACCATGTTTCCTTTACACCAAGGCAATGTCATTCATTTTTCTAATAGTCCCCACAATCAACAACACAAAATCTTTGAAGATCTTATTCTTGATGACTATGATTCTTTGTTAGTCAATGATTGTGATAAATTATTCAATTTTAGTAGTAGCCAGCCTAACAAAATATTTGATGAGGCTATTAAGAATCATGATAATTGCAACCAACAAATGAAGAAGAAAATGGTTCATAAGGTGATTGAGAGGCAAAGGAGAAAAGAAATGGCTACCTTTTGTTCATCTCTTCGATCCTTACTTCCTCTTGAATTCATCAAGGGAAAACGTTCAATATCTGACCACGTGAATGAGGCAGTGAAATACATAAAACACATGAAGAATAATATCAATGAGCTTAGTGCCAAAAGAGATGAACTAAAGAAATTTTTCCATTAA 441 0.3288 MMDHTMFPLHQGNVIHFSNSPHNQQHKIFEDLILDDYDSLLVNDCDKLFNFSSSQPNKIFDEAIKNHDNCNQQMKKKMVHKVIERQRRKEMATFCSSLRSLLPLEFIKGKRSISDHVNEAVKYIKHMKNNINELSAKRDELKKFFH 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01382 146 SMART finulus 81 133 IPR011598 GO:0046983
Car08g01382 146 Coils Coil 117 144 - -
Car08g01382 146 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 11 143 - -
Car08g01382 146 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 143 IPR015660 GO:0003700|GO:0006357
Car08g01382 146 Pfam Helix-loop-helix DNA-binding domain 76 127 IPR011598 GO:0046983
Car08g01382 146 Gene3D - 66 145 IPR036638 GO:0046983
Car08g01382 146 CDD bHLH_AtORG2_like 76 143 - -
Car08g01382 146 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 142 IPR036638 GO:0046983
Car08g01382 146 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 127 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01382 Car-Chr8 22070374 22072776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01382 76 141 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 65.152 2.43e-24 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car08g01382 HLH 1.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01382 - - cam:101510619 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01382 08 22070374 22072776 Car04g01258 04 12880315 12881537 PCT