Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01378 ATGGTTTTCCAAAAATCAACCATGACCCTCTTTTCATTATCAATTGCATTTACCTTCTTAACTTACCTCTTAACCTTATCCCAAACACAATTATCTCCAAAACCATGCAACGATCCCTACAAACAACTCAACCTTATTCTTAATCCAAACGGCACAATCACACGCCCAAATAAATCACCAGAAACCCCTCCCTCACTAGATCCCACTCTCCCAATTCTCTCTAAAGATCTTATCATCAACCAATCAAAACACACGTGGGCTAGGATCTACCTACCCCGCAAAGCACTGGATCAAAACCCCAAGAACCGTTTTCCGCTTGTGATTTTTTTCCACGGTGGCGGATTTATTTTCCTAAGTGCGGCCTCAACTATTTTTCATGATTTTTGTTTTAACATGGCAAACGACGTCGTTGCGGTTGTTGCGTCTATAGAGTACCGTCTCGCACCAGAACATAGACTCCCAGCTGCATACGAAGATGCGGTGGAGGCGCTGCACTGGATAAAATCTAACCAAGATGATTGGTTTAAGGGACTTAAAAATTATGTCGATTATTCCAATGTTTTTCTTATGGGGAGTAGTGCGGGTGGGAATATAGCGTACAACGCGGGTCTACGTGTAGCTGCACGCGATGATGAATTTTCTAAGATGATCAAAGGGATAATATTAGTTCAACCTTATTTTGGTGGAACCCACAGGACGAATTCGGAAATTAAACTTGCTAATGATTCTCATTTGTCGTTGTGTAATAATGATATGATGTGGGAATTGTCGTTACCTATTGGAGTTGACCGTGATCATGAGTATTGTAATCCAACGGTGGGAGATAGTGTTTTGAAATTGGAAAACATCAGACGGCTTGGATGGTTTGTGTTGGTTACTGATTGTGATGGTGACCCACTTGTGGACCGTTCGATTGGCTTGGTGAGTTTGATGGAAAAAAAGGGTGTGAGAGTTGTGGGACATTTTACAAGAGGAGATTATCATGGTGTGCAAGATCGTGATCCATTGAAAGCTAAGGAACTCTTTGTTGTAATTAAAAGTTTTTTTGGGTCTCTGTTTAATTATACAATAGAATGA 1077 0.4085 MVFQKSTMTLFSLSIAFTFLTYLLTLSQTQLSPKPCNDPYKQLNLILNPNGTITRPNKSPETPPSLDPTLPILSKDLIINQSKHTWARIYLPRKALDQNPKNRFPLVIFFHGGGFIFLSAASTIFHDFCFNMANDVVAVVASIEYRLAPEHRLPAAYEDAVEALHWIKSNQDDWFKGLKNYVDYSNVFLMGSSAGGNIAYNAGLRVAARDDEFSKMIKGIILVQPYFGGTHRTNSEIKLANDSHLSLCNNDMMWELSLPIGVDRDHEYCNPTVGDSVLKLENIRRLGWFVLVTDCDGDPLVDRSIGLVSLMEKKGVRVVGHFTRGDYHGVQDRDPLKAKELFVVIKSFFGSLFNYTIE 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01378 358 Pfam alpha/beta hydrolase fold 107 330 IPR013094 GO:0016787
Car08g01378 358 PANTHER ARYLACETAMIDE DEACETYLASE 32 351 - -
Car08g01378 358 SUPERFAMILY alpha/beta-Hydrolases 58 355 IPR029058 -
Car08g01378 358 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 107 123 IPR002168 GO:0016787
Car08g01378 358 PANTHER CARBOXYLESTERASE 120-RELATED 32 351 - -
Car08g01378 358 Gene3D alpha/beta hydrolase 40 352 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01378 Car-Chr8 21935727 21937354 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01378 50 320 Carbohydrate Esterase AT5G16080 37.906 4.61e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01378 - - mtr:MTR_6g464120 531.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01378 08 21935727 21937354 Car04g01255 04 12858973 12860447 PCT
Car04g01254 04 12857055 12858418 Car08g01378 08 21935727 21937354 PCT