Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01371 ATGGGTAAAGAATGGTATTGGGTTGGAAAATCATCCAAAAAAAGTGTTATAGTTGAACAAGGTGCTAAAACAACAACACCTAGTGGTTGCATGTGTGCTGTTTTTCAGTTATTTGATTTTCATACATTTCAATTTCCAACAACCTTAAACAACCAACAACAAGAAAATTCTTTCAAATCACTTTCTTGCATCTCACAAGACCAAATTAATAAAGGTATTGAAGCTCCTAGGAATAGCTTGGAATCTGAAGATGGCACATTTTCTTCTCTTTCAAAAGAAGATAATTTTAAAATGCCAAAGAATATACAAATCAAAACAAAAAGGAGCAATGTTGGAAATTTGAATGATTTTTCCTCAGAAATGAATTCACCAGGAACAAAGACACCAACTTTGGTAGCAAGATTAATGGGTTTAGAACTTCTTCCAAATGAAAACTCACCAACTTTTTCTTCATGTCTTTCAACTCCAAATTCACAAGGTAAAAATATTACTCAAAATTTTCACCGAGTTAGAACAAAACAACACATTCAAACCAAACATAGAAATAGCATTGATAGTAGTGAAATTTCATCTACTAGAAAATCAGATGTTGATTACTATCATCATAGATTATCTCTTCAAATCAACAAAGAGAATCTTTGTGAGGATTTAGAGTTACCAAGATTCTCATTTTCAAAAAAGAAAATCCATGATGAGAATAATAGTAGCAATAAAAGTTCTAGTCACTATGCTAGACAAATTGTTAAACAAATTAAGGAAAGTGTTACTAGAAAAGTTGGTCAAGACATCACAAACAACAATCTCAAAAACAAAGAATTTGTAGAACAATCAAGAATAAAAAAATCTTCAAAAACATCATTGAAACCACTTGATGAATTTTCAAGTGAAGGGAAGCATTCAAATTCATCATTTTCACCAAGGATAAGATTCATTGacaacaaacacaaaccaaacacaacaacaacaacatcaaaagaactaaacaCACCCCCCAATTTTGTGAAAGCACCCCCACCACAACCAAAGCTTCCAAGAGTCTTAACAAAACCAAAGGGACAAGAATCAAGGGACAAGAAATCAGTGTCAACAAAATGTAAGAAAAGTACTAATGAAAAATTCAGCTCAAGATTTAGCTCAAGATTTCATAGTCCAAAATCAAGTTCTAGAGCAAATGACATCAAAAGTAACACCAAAAGCAAAAAAAGTACTCAACCATTGTCAAGTAATCTCCTCAACAACATCAATGCTGTTGTCAAAACAGATCCTTTTGTTCAGAAACAGGTATCTGATCCTCAAAACTCCAAATTCTACTCACACTTATCTAATTGTTCAAGCAAGAGGTACAAAAATGAAGTAACAACCACACTCCTCATCCAAGAAACAATCACCAACTTTACAAAAGACAAATTTAACGGTTCATCTATCATTGAAACTCACAAACCAGAATTTCAGTACATCACAGAAATCTTAAACAAACAAGGTACAACAAAAACAGTGTCTTTTAACAAGTGGTTCTCTCCAACACACCCACTTGACCCATCAATCTTCCATCACCTAGAACACAATCCCAAAGATAAAGTTCGAAACTTTATCACAAAAAACCAACTGGGTCACCGTTGGAATCGAAAATTGTTGTTTGATTTAGTGGATGAAGTTCTAATTGAGATTTTGAAGCAAAATGGTAATAAAAAAAAGTTGAGTTTTTTACATAGTTTTTGTAATGAGTGGACAATTATGGAGTTAACAGAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGTGTGGAAAAGAATTGGTGAGTTTCCATGTGCTAAGTGTGAAGTTTTGGATGACATTGATAATTTGA 1863 0.3108 MGKEWYWVGKSSKKSVIVEQGAKTTTPSGCMCAVFQLFDFHTFQFPTTLNNQQQENSFKSLSCISQDQINKGIEAPRNSLESEDGTFSSLSKEDNFKMPKNIQIKTKRSNVGNLNDFSSEMNSPGTKTPTLVARLMGLELLPNENSPTFSSCLSTPNSQGKNITQNFHRVRTKQHIQTKHRNSIDSSEISSTRKSDVDYYHHRLSLQINKENLCEDLELPRFSFSKKKIHDENNSSNKSSSHYARQIVKQIKESVTRKVGQDITNNNLKNKEFVEQSRIKKSSKTSLKPLDEFSSEGKHSNSSFSPRIRFIDNKHKPNTTTTTSKELNTPPNFVKAPPPQPKLPRVLTKPKGQESRDKKSVSTKCKKSTNEKFSSRFSSRFHSPKSSSRANDIKSNTKSKKSTQPLSSNLLNNINAVVKTDPFVQKQVSDPQNSKFYSHLSNCSSKRYKNEVTTTLLIQETITNFTKDKFNGSSIIETHKPEFQYITEILNKQGTTKTVSFNKWFSPTHPLDPSIFHHLEHNPKDKVRNFITKNQLGHRWNRKLLFDLVDEVLIEILKQNGNKKKLSFLHSFCNEWTIMELTEXXXXXXXXXXXXXXXECGKELVSFHVLSVKFWMTLII 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01371 620 Pfam DUF761-associated sequence motif 120 146 IPR032795 -
Car08g01371 620 Pfam Domain of unknown function (DUF4378) 482 565 IPR025486 -
Car08g01371 620 MobiDBLite consensus disorder prediction 315 330 - -
Car08g01371 620 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 571 - -
Car08g01371 620 MobiDBLite consensus disorder prediction 230 249 - -
Car08g01371 620 Coils Coil 599 599 - -
Car08g01371 620 MobiDBLite consensus disorder prediction 374 408 - -
Car08g01371 620 MobiDBLite consensus disorder prediction 349 373 - -
Car08g01371 620 MobiDBLite consensus disorder prediction 289 408 - -
Car08g01371 620 Coils Coil 578 583 - -
Car08g01371 620 MobiDBLite consensus disorder prediction 74 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01371 Car-Chr8 21648000 21651743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01371 101 564 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 32.046 2.29e-37 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01371 - - mtr:MTR_6g089530 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01371 08 21648000 21651743 Car04g01247 04 12770657 12774069 PCT