Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01360 ATGGGTAAAGGGGGAATGTCAGTTGATGATCATTTGGAAGATAAAGATGGAAGTTTTGAACAACAGAATATGGCTGCTTGGCTTGTTGGTTTGAACAATCTCAAGATTCAACCTTTCAATCTTCCTACTCTAGGACCCCATGATGTCAGAATTAGAATGAAGGCTGTTGGAATTTGTGGGAGTGATGTTCACTACCTCAAGACACTGAGATGTGCAGATTTTATAGTGAAAGAACCGATGGTTATTGGTCACGAGTGTGCCGGGATCATAGAAGAAGTTGGTAGTCAGGTAAAGACTTTGGTGGCTGGCGACCGTGTGGCGGTCGAGCCTGGGATCAGTTGTTGGCGTTGTAACCATTGCAAACTTGGTCGATATAATCTATGCCCTGAAATGAAGTTTTTTGCTACTCCACCAGTTCATGGTTCCTTGGCTAATCAGATAGTACATCCAGCAGACCTATGTTTTAAACTGCCAGACAATGTGAGCTTGGAGGAAGGTGCAATGTGCGAACCATTAAGTGTCGGCGTTCATGCTTGTAGGCGAGCAAATATCGGACCAGAAACGAATGTGTTGATTATGGGAGCAGGACCAATTGGACTTGTTACAATGCTTTCGGCTCGCGCTTTTGGGGCACCCAAGATAGTCATTGTTGATGTCGACGACCATCGTTTATCTGTTGCGAAAAATCTTGGTGCTGATGATATTGTTAAAGTTTCAACAAACATTCAGGATGTAGGTGAAGAAGTTAAGAAGATACATAATGTTATGGAAGGTGGTGTAGATGTTACATTTGATTGTGCTGGTTTTGACAAAACAATGACTACAGCATTGGCTGCTACTCAACCAGGTGGCAAAGTTTGTCTAGTTGGAATGGGTCATTCTGAAATGACTGTGCCACTCACCCCAGCTGCTGCAAGGGAAGTTGATGTGATTGGCATTTTCCGCTATAAGAATACATGGCCTCTTTGCCTTGAGTTTATAAAGAGTGGAAAAATTGATGTAAAACCACTTATAACTCATAGGTTTGGGTTCTCTCAAAAGGAAGTGGAAGAAGCCTTTGAAACAAGTGCTCGTGGTGGTAACGCCATTAAGGTCATGTTCAATCTTTAG 1110 0.427 MGKGGMSVDDHLEDKDGSFEQQNMAAWLVGLNNLKIQPFNLPTLGPHDVRIRMKAVGICGSDVHYLKTLRCADFIVKEPMVIGHECAGIIEEVGSQVKTLVAGDRVAVEPGISCWRCNHCKLGRYNLCPEMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLSARAFGAPKIVIVDVDDHRLSVAKNLGADDIVKVSTNIQDVGEEVKKIHNVMEGGVDVTFDCAGFDKTMTTALAATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVIGIFRYKNTWPLCLEFIKSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01360 369 Pfam Alcohol dehydrogenase GroES-like domain 46 157 IPR013154 -
Car08g01360 369 PANTHER L-IDONATE 5-DEHYDROGENASE 19 369 - -
Car08g01360 369 PANTHER SORBITOL DEHYDROGENASE 19 369 - -
Car08g01360 369 Pfam Zinc-binding dehydrogenase 197 328 IPR013149 -
Car08g01360 369 SUPERFAMILY GroES-like 23 195 IPR011032 -
Car08g01360 369 Gene3D - 34 355 - -
Car08g01360 369 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 83 97 IPR002328 GO:0008270|GO:0016491
Car08g01360 369 CDD sorbitol_DH 25 368 IPR045306 GO:0016616
Car08g01360 369 Gene3D - 174 314 - -
Car08g01360 369 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 160 333 IPR036291 -
Car08g01360 369 SMART PKS_ER_names_mod 30 367 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01360 Car-Chr8 21259218 21265458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01360 36 302 Monolignol Biosynthesis Gene Families AT4G37980 27.698 1.60e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01360 K00008 - gmx:100820630 676.011