Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01354 ATGGAGTGTGAGAGATCTAATATATTTGTTTTGGTTGTTGACAATGATGATGTTTCTTTGGATATTCTTGCAAATATTCTCATCGCATGGCAATATAGAGTTATCACTGCTAAAAATGCTCTTGATGCTATGCAACATCTTCGAGACTTTGATGGAGTTTTTGATCTCATAATTACAGAAGTTCATTTACCAGGAATTAGTGGAATTGCATTTCAAAAACATGTTAAAGATGATTATCAAATTCCTGTAATAGTGATGTCTAATGATAGAAGGGAGAGTGTAATTTGCAATAGCTATGAATATGGAGCAGCACATTATATAATGAAACCATTTTGTGCTGAGGATTTCAAAGACATTTGGAAAATTGCTATGGATGCAAAGAAAGAGAAACTATTCATTGAAAATGAATTAATAATATATGATCAAGAAAGAGAGTCATTTGGTGGTGATGATGATGTTAACTCACTTAACACATTGAATGATGCTAAGATTAAAAAGAAATATTGCAAGAGAAAGAATGATGAATATCAAGATGGTGATTTTCAAGTTTTGAAAAAACCTAAGCTTGTTTGGACAACTTATCTTCACAATCTTTTTCTTCTTGCTATCAAGCAAATTGGATTGGACAAGGCTGTGCCAAAGAAAATTCTGGAGGTGATGAATATTCCAAACTTGACAAGAGAAAATGTAGCAAGTCACTTACAGAAATATCGCATATTTCTGAGAGATGTAGCTGAGAAAGGAATGATTGGAGGAATATCTCACAGGGCATTAAGGTCAAGATTTGCTTCAAGTCTTCCAGTTTCAGTGATCAAAGAAATCCAAGCTATAAGAACAAACAAACTTCGTGCACCAACTCTTCAATATTTGCAAAAACTATCATACCAAAATGGTGATGATAACAATGTTCTTCAACAATTCAACCAAGTTTCAAGCAACAACAATGATCAATTCTCTTTTTTACAAAAAGGGTTGACTCTTCAAGAATTGGATCAAGTTAGAATTGGTAAATCAAGTTTGGAAAACAATGTTGCTATTCAACAAAACAAGTTTGGAATAAGCTCTTCTTCAATTCCAACTTTTCATCAAGCAAAAAATTCATACAATGATGGTGCTAATGGATTTCATGGATTAATGAATTCTTCTTCAAGTTTCTTAACAAGGGGTTTGAATAATTATGGTAACCAAAATTATGGTTTAAGAAATTTGAACATGACATCATTGAACAACAACTCTAATAATGTTCTATTTCAGAAAAATAACATTTTTATTCCAATGAGTAATAACCCTTTTGGAGTTCAACTCAATAATGGATTTGGTTTCAATGTTGGAGCAAATAATGAAAATGTGAATGTTGGTGGAAGCTTTGGTTTGGTTCAAGGAGGGTTTGGTTTGAATTCTGTTTCTGATGTTAGTGgtggaagtggaagtggaagtggaagtggaagtgAGGTTCCAACAACATTTGTGAATGCTGAAAATGTTGCTGAGGTTAATCAATTTGTGGAAAATGTGAATCAAAATAATGGTGCTGCTAATTTAATCAGTGAGAATGAGTTCAAGCAAATGGAAATTAATGTTGCTGATTTCTTGATGGCTGATGATAATCTGAATCTTCTTAATGAGATGGATGTGAACCGTGTTGATGCAAGTGGATTGTCGAATGCTGACTTTAATTTCTTCCAAGATGAGCAACCCTTTGAGCAGTTGCGAGGAAATGAAGGATGTTTTAATAGGTTCATGGGGGACAAAGCTTCTTCAGCACCTACTTCAACCATTGGAACTCAGGAATTGGATGTGGATCTTATTGAAGCCCTATTTGGTGCTAAGGAAAACTAG 1839 0.3284 MECERSNIFVLVVDNDDVSLDILANILIAWQYRVITAKNALDAMQHLRDFDGVFDLIITEVHLPGISGIAFQKHVKDDYQIPVIVMSNDRRESVICNSYEYGAAHYIMKPFCAEDFKDIWKIAMDAKKEKLFIENELIIYDQERESFGGDDDVNSLNTLNDAKIKKKYCKRKNDEYQDGDFQVLKKPKLVWTTYLHNLFLLAIKQIGLDKAVPKKILEVMNIPNLTRENVASHLQKYRIFLRDVAEKGMIGGISHRALRSRFASSLPVSVIKEIQAIRTNKLRAPTLQYLQKLSYQNGDDNNVLQQFNQVSSNNNDQFSFLQKGLTLQELDQVRIGKSSLENNVAIQQNKFGISSSSIPTFHQAKNSYNDGANGFHGLMNSSSSFLTRGLNNYGNQNYGLRNLNMTSLNNNSNNVLFQKNNIFIPMSNNPFGVQLNNGFGFNVGANNENVNVGGSFGLVQGGFGLNSVSDVSGGSGSGSGSGSEVPTTFVNAENVAEVNQFVENVNQNNGAANLISENEFKQMEINVADFLMADDNLNLLNEMDVNRVDASGLSNADFNFFQDEQPFEQLRGNEGCFNRFMGDKASSAPTSTIGTQELDVDLIEALFGAKEN 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01354 612 SMART REC_2 8 120 IPR001789 GO:0000160
Car08g01354 612 PANTHER RESPONSE REGULATOR 23-RELATED 8 538 - -
Car08g01354 612 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 186 239 IPR006447 GO:0003677
Car08g01354 612 Gene3D - 183 243 - -
Car08g01354 612 Gene3D - 2 136 - -
Car08g01354 612 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 538 IPR045279 GO:0009736
Car08g01354 612 Pfam Response regulator receiver domain 10 117 IPR001789 GO:0000160
Car08g01354 612 SUPERFAMILY Homeodomain-like 184 243 IPR009057 -
Car08g01354 612 ProSiteProfiles Response regulatory domain profile. 9 124 IPR001789 GO:0000160
Car08g01354 612 SUPERFAMILY CheY-like 7 126 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01354 Car-Chr8 21172199 21177801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01354 8 262 Response Regulator Gene Family AT5G07210 37.153 7.30e-47 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car08g01354 Response_reg 1.3e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01354 - K14491 cam:101506714 1112.06