Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01350 ATGGCACCTTCTCGGGTGGCAGGAGGTTTAGCCCAATCATCATCAAGTTCAGGAATTTTCTTTCAAGGAGAGGGACAGTCACATAATTTAGTTAACTCTCACTTGACCTCGTCTTTAGTTAATTCATCAAACACTGTTCCTGGGACCGGTCATTCGAACCTTGGTCCAGTTTCTGGGGATATGAATAATGCAGTTTTGAACAGCGTGGCAAACTCAGCACCAAGTGTTGGAGCTAGTTCTTTAGTCACAGATGCAAATTCTGCACTCTCCGGTGAACGCCATATGCAAAGAAGTGCAAGCATTAACGGAGATTCGTATTTAAGATTACCTGCCTCACCCTTGTCATTTACATCAAATAATATTAGTATTTCTGGATCACCTGCAATGGATGGCTACTCTGTAGTACAGCAGAATTCTCATCAAGATCAGAATGCTCAACAATTGCAGCAGAATCAACAACAGCTGCAGGGTGCTGCAAGTTCAATGCCTCTGCCTGCTTCTCAAACTGCATCTCCGCACCAAACGGGTGCACAAGTAACTGGATCTTTCATGCAAGATCCAAATAATATATCCCACCTGCTAAAAAAACCTAGGTTGGATATCAAACAAGAAGATATAATGCAACAACAGGTAATACAACAGCTTCTTCAGAGACAAGACCCCACACAATTCCAAAGTCGTAATCCACAGTTACAGGCTATGTTTCAGCAACAGCATAGGCTGAAGCAACAACAAATCTTTCAGTCATTGCCCCAGGCCCAGCGAGTGCAATTgctgcagcagcagcagcaacaacaacaacagcaacaaatgcagaggcagcaAATACAACAACAAATGATTCAGCCCTCAGCTAGTGTAAAGCGTCCATATGATGGTGGTGTTGGTGGTGTATGTGCCCGTCGATTGATGCAGTACCTCTATCATCAAAGGCAGCGACCAAATGATAATAGTATTGCATATTGGAGAAAATTTGTAGCTGAATATTACTCTCCTCGTGCAAAGCAACGATGGTGCTTGGCATTATATAGCAATGTTGGGCACCATTCACTTGGTCTTTTACCCCAAGCAACTACGCATGCTTGGCAGTGTGACATTTGTGGAACTAAATCTGGAAGAAGGGGATTTGAGGCAACTTTTGATATACTACCCAGACTCAACGTAGTCAAATTTGGCAGTGGAGTAATTGACGAACTGTTGTTTTTGGACCTGCCACATGAAACAAGATTTCCTTCTGGTTTGATGATGTTAGAATATACAAAAGCAGTTCAAGAGTGTGTGTACGAGCAGCTTCGAGTTGTTCGTGAGGGTCAACTTCGTATCGTATTTACTCAAGACCTGAAGATATTTTCTTGGGATTTCTGTGTAAGGCGCCATGAAGAACTTCTTCCCCGAAAGTTAGTTGCACCACAGGTCAACCAATTAGTTCAAGTAGCTCAAAAGTGTCAGAGTACAATTTCTGAAAGTGGGTCAGATGGGGTTTCTCAGCATGATTTGCAAACAAACAGCAACATGGTCCTCACAGCTGGGCGTCAGCTTGCAAAGAGTTTGGAGCTACAATCACTAAATGACTTAGGCTTTTCAAAAAGATTTGTGAGAACTTTGCAGATTTCTGAGGTTTGCAATAGCATGAAAGATCTAATCGATATCTGTTACGATCACAAAGTTGGACCAACTGAGAGTTTGAAAAATTATTCTCGATATTCAACTGCGTCAAAGCTCCAAATGCAAAAGATGCAAGAGATGGAACAGCTAGCAAATGCTCAAGGTCTACCACATGATAGAAACACACTTAATAAGTTATTGGCAATGAATCCCGGATCGAATAATATAAACAGTAATCACAATATGGGCAATCGTGGTGCTCTGACTGGGTCAGCACAAGCTGCTTTGGCAATGGCCAATTACCAGAATCTTCTCATGAGGCAAAACTCCATGAATTCAAGCCCTAGCTGCTCACTTCAGCGAGAAGGATCCCCTTTCAATAACTCGAACCAGAGTCCCTCATCAGCTTCTTTGCAAGGTACTGGCGCCGCATCAATGCCGGGCTCTATGCAGAATTCGCCTCGTAGTGGTGGTTTCTCAAATGCTCATCTTCCCTCACAACAACAGCGGCAGCAGCAACATCTTCAACAACGCTCATTAAGTGCGAATAGTTTACCTCAACAAAATCACTCACAGGGACCTCAAGGAAATCAATCACTGCAACAGCAGATGATCCAGCAACTACTGCAAGATATGTCGAATAACAACGGGGGAGGGCAACAACAGTCTCATAGTGGACCCAATGTAAGTGGAAATATGTCAAAGAACGGGCTGGGTTTTGCTGGTCAAACTCCACCCTCAACTGGAGGTGGCTCTGCCAATGGTCCTGGAAATAATGGACCTGTTTCAAGGAGTAATAGCTTCAAAGCAGCTTCAAACAGTGATTCTTCTGCAGCAGCAGTTGGAGGCAACAGTGGATTCAACCAGAGAACATCTGATATGTCACAAAGTCTCCCTTTGCAAGATGTGGCTCAGGAATTTGGCCATGATTTTGCTGATAACCCCTTCTTTAACAGTGATCTAGATGATAACATGGGATTTAACTGGAAGACATGA 2601 0.4237 MAPSRVAGGLAQSSSSSGIFFQGEGQSHNLVNSHLTSSLVNSSNTVPGTGHSNLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSALSGERHMQRSASINGDSYLRLPASPLSFTSNNISISGSPAMDGYSVVQQNSHQDQNAQQLQQNQQQLQGAASSMPLPASQTASPHQTGAQVTGSFMQDPNNISHLLKKPRLDIKQEDIMQQQVIQQLLQRQDPTQFQSRNPQLQAMFQQQHRLKQQQIFQSLPQAQRVQLLQQQQQQQQQQQMQRQQIQQQMIQPSASVKRPYDGGVGGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKQRWCLALYSNVGHHSLGLLPQATTHAWQCDICGTKSGRRGFEATFDILPRLNVVKFGSGVIDELLFLDLPHETRFPSGLMMLEYTKAVQECVYEQLRVVREGQLRIVFTQDLKIFSWDFCVRRHEELLPRKLVAPQVNQLVQVAQKCQSTISESGSDGVSQHDLQTNSNMVLTAGRQLAKSLELQSLNDLGFSKRFVRTLQISEVCNSMKDLIDICYDHKVGPTESLKNYSRYSTASKLQMQKMQEMEQLANAQGLPHDRNTLNKLLAMNPGSNNINSNHNMGNRGALTGSAQAALAMANYQNLLMRQNSMNSSPSCSLQREGSPFNNSNQSPSSASLQGTGAASMPGSMQNSPRSGGFSNAHLPSQQQRQQQHLQQRSLSANSLPQQNHSQGPQGNQSLQQQMIQQLLQDMSNNNGGGQQQSHSGPNVSGNMSKNGLGFAGQTPPSTGGGSANGPGNNGPVSRSNSFKAASNSDSSAAAVGGNSGFNQRTSDMSQSLPLQDVAQEFGHDFADNPFFNSDLDDNMGFNWKT 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01350 866 MobiDBLite consensus disorder prediction 136 189 - -
Car08g01350 866 PANTHER LIM DOMAIN-BINDING PROTEIN 177 864 IPR029005 -
Car08g01350 866 PANTHER LIM DOMAIN-BINDING PROTEIN 5 151 IPR029005 -
Car08g01350 866 Coils Coil 259 279 - -
Car08g01350 866 MobiDBLite consensus disorder prediction 40 59 - -
Car08g01350 866 Pfam LIM-domain binding protein 302 563 IPR029005 -
Car08g01350 866 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 177 864 - -
Car08g01350 866 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 151 - -
Car08g01350 866 MobiDBLite consensus disorder prediction 645 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01350 Car-Chr8 20942582 20948010 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01350 287 572 C2H2 Transcription Factor Family AT1G43850 53.147 2.74e-97 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01350 - - gmx:100816886 1140.56