Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01331 ATGGGTTTTCTCCGGCGACTTTTCGGCGGCAAAAAACACCGTAATCCACCACCGGAACTCACTTTTTCCAAACCCGAAAAGCACAACAGAAGCTGGAGTTTCGCTAAGAACAGTACAAGGGAAAAATCCAATTCACTTTCTTCACTAAACAACAGAAATTCTGAACCTTCTATTACTTCTGATAATTTCGACGCTAATAAACATGCCATTGCTGTAgccgccgctaccgccgccgtcgctgaggccgcactcgccgccgcTCATGCTGCCGCGGAGGTTGTCAGACTGACGAGTAACACCGGCTCCGGAAATTCTGCCGGAATACCTGCAACTCCGACAAGTGGCCGGCGACGGTTGCCGGAGGAAATTGTCGCCGCCGTGAAGATTCAGTCGGCGTTTAGAGGTTATTTGGCAAGGAGAGCATTAAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCATTGGTGAGAGGTCACATAGTAAGAAAGCAAACCTCAGATATGCTAAGACGCATGCAAACATTGGTTCGACTTCAATCGCGCGCACGTGCGAGTCGTTTGCACGTGTCGGATAATACAGACTCTTTCAAGTCTTCACATTCGCGTTATCCAGTTCCTGATGATTATGAGCATCCGCTTCGTGTCTATAGTACGAAATTCGACGGATCTTCCATCCTCAAGAGATGTAGTTCAAATGCATATTATAGAGACATGAACTTAGAAAGAGCCCGGTTCGGTTCGAGTTGGTTAGACAGTTGGATGGAAGAAAATACACGGAGCCAAACCGGCGATTCTTCATCTAGTACCAAACATCTTGATGATGAAAAGAGTGATAAGATTCTTGAAGTAGATACATGGAAGCCACATTTGAACTCACACCATAGTACTAGTAACTCTTTTCATGCCACAAATCACTACTCATCTTCTAATTACAACAATGACAATTTTATAGCATTCGAGTCGCCCTCGAAGCGTTCTTCTAAAACTCACAATTCAATTCTCTCTTCTATGAAACATCATAAAGGAAAAGAAGAACTAGCTTCACGAACGGCCGAGAATAGTCCGCAGGCATTTTCGGCTTCTTCGAGACATGGAAGTGGTGGAAGGAGAGATTCTTTTACACCAACTAAAAGTGAGTGTTCGTGGGGTTTCTTCAATGGTTACTCGGGTTATCCGAGCTACATGGCGAATACCGAGTCTTCAAGAGCGAAGGCTCGGTCGCAAAGTGCACCAAGACAAAGGCTAGAGTTTGAAAGATATGGTGCAACAACAAGATCTATTCAATGTCTTTGGGAATCAGGGTCTAATTCAGATAGAAATTCTAGCTTGAATAGAATTGGAAGTAACAATTTAAGGTGA 1356 0.4204 MGFLRRLFGGKKHRNPPPELTFSKPEKHNRSWSFAKNSTREKSNSLSSLNNRNSEPSITSDNFDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSNTGSGNSAGIPATPTSGRRRLPEEIVAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTSDMLRRMQTLVRLQSRARASRLHVSDNTDSFKSSHSRYPVPDDYEHPLRVYSTKFDGSSILKRCSSNAYYRDMNLERARFGSSWLDSWMEENTRSQTGDSSSSTKHLDDEKSDKILEVDTWKPHLNSHHSTSNSFHATNHYSSSNYNNDNFIAFESPSKRSSKTHNSILSSMKHHKGKEELASRTAENSPQAFSASSRHGSGGRRDSFTPTKSECSWGFFNGYSGYPSYMANTESSRAKARSQSAPRQRLEFERYGATTRSIQCLWESGSNSDRNSSLNRIGSNNLR 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01331 451 MobiDBLite consensus disorder prediction 430 451 - -
Car08g01331 451 MobiDBLite consensus disorder prediction 36 62 - -
Car08g01331 451 MobiDBLite consensus disorder prediction 348 373 - -
Car08g01331 451 MobiDBLite consensus disorder prediction 1 62 - -
Car08g01331 451 ProSiteProfiles IQ motif profile. 146 173 IPR000048 GO:0005515
Car08g01331 451 Gene3D - 124 175 - -
Car08g01331 451 MobiDBLite consensus disorder prediction 336 373 - -
Car08g01331 451 PANTHER IQ-DOMAIN 5-RELATED 1 441 - -
Car08g01331 451 ProSiteProfiles IQ motif profile. 125 150 IPR000048 GO:0005515
Car08g01331 451 MobiDBLite consensus disorder prediction 17 35 - -
Car08g01331 451 Pfam Protein of unknown function (DUF4005) 359 420 IPR025064 -
Car08g01331 451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 167 IPR027417 -
Car08g01331 451 SMART iq_5 121 143 IPR000048 GO:0005515
Car08g01331 451 SMART iq_5 144 165 IPR000048 GO:0005515
Car08g01331 451 Pfam IQ calmodulin-binding motif 125 143 IPR000048 GO:0005515
Car08g01331 451 Pfam IQ calmodulin-binding motif 146 163 IPR000048 GO:0005515
Car08g01331 451 PANTHER CALMODULIN-BINDING PROTEIN 1 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01331 Car-Chr8 20208448 20217115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01331 1 416 IQD Protein Family AT5G62070 47.518 2.20e-59 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01331 - - gmx:100785181 535.028