Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01311 ATGGGTAAGAAGAAGAGAACTAGGGTTTCCGATTCAGAAGATGAAGAGATCGAATTCGGTATCAACAACGAAAACACACTCTACCAGGTTCTTGGTGTGGAGAAAACAGCATCTCAACAGGAAATAAAGAAGGCGTATTACAAATTGGCTTTGAGACTTCATCCTGATAAGAATCCTGGTGATGAGGAAGCTAAAGCCAAATTTCAGCAATTGCAGAATGTTATCTCCATTCTCGGGGATGAAGAAAAACGGGCACTATATGATCAAACTGGTTCTGTTGATTGTGCTGATCTTGGAAGTGACGTTGTGCAGAACCTTCGAGAATATTTCAGAACAATATACAAGAAGGTCACTGAAGTTGATATTGAAGAGTTTGAAGCAAACTATAGAGGATCCGACTCTGAGAAGAATGATTTGATTAATCTTTACAAAGAATTCAAGGGTAATATGGACAGGTTATTTTGTTCAATGCTTTGTTCGGATCCTAAACTTGACTCTCACCGATACAAAGATATTATTGATGAAGCTATAGCTGCTGGAGAACTAAAGGAAAGGAAAGCCTACAAGAAATGGGCTAAGAAAATAGCAGAAACCAAGCCACCAACTAGTCCTTTAAGAAGGAGGGAAAAATCAAATAAGGAACCAAAAATGGATTTGTATGCTATGATATCACAACGACGAGATGAGAGGAAGGGCAAGTTTGATACTATGTTCTCGTCTTTAATTTCAAAATATGGTGGAGGTACTGGACCAGAACCTTCTGAAGAGGAATTTGAAGCTACTCAGAGAAAGATGGAAAAAAGAAGGTCTTCAAAAAAGTAA 822 0.382 MGKKKRTRVSDSEDEEIEFGINNENTLYQVLGVEKTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLQNVISILGDEEKRALYDQTGSVDCADLGSDVVQNLREYFRTIYKKVTEVDIEEFEANYRGSDSEKNDLINLYKEFKGNMDRLFCSMLCSDPKLDSHRYKDIIDEAIAAGELKERKAYKKWAKKIAETKPPTSPLRRREKSNKEPKMDLYAMISQRRDERKGKFDTMFSSLISKYGGGTGPEPSEEEFEATQRKMEKRRSSKK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01311 273 CDD DnaJ 26 80 IPR001623 -
Car08g01311 273 Pfam DnaJ domain 27 88 IPR001623 -
Car08g01311 273 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 273 IPR042977 -
Car08g01311 273 MobiDBLite consensus disorder prediction 198 218 - -
Car08g01311 273 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 1 273 - -
Car08g01311 273 SUPERFAMILY Chaperone J-domain 24 98 IPR036869 -
Car08g01311 273 Gene3D DnaJ domain 11 109 IPR036869 -
Car08g01311 273 MobiDBLite consensus disorder prediction 242 273 - -
Car08g01311 273 PRINTS DnaJ domain signature 28 46 IPR001623 -
Car08g01311 273 PRINTS DnaJ domain signature 46 61 IPR001623 -
Car08g01311 273 PRINTS DnaJ domain signature 63 83 IPR001623 -
Car08g01311 273 PRINTS DnaJ domain signature 83 102 IPR001623 -
Car08g01311 273 SMART dnaj_3 25 83 IPR001623 -
Car08g01311 273 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01311 Car-Chr8 19672402 19676177 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01311 28 88 C2H2 Transcription Factor Family AT1G74250 42.424 2.36e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01311 K09529 - gmx:100781463 431.795