Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01303 ATGTGGGAAAAAAAACTACCATCTCTCAATGGTGGTTTAGAATGGTGTTTGCATCTCGTCGCCTTGTTGAAGTGGATCATCAAGGTTCCTACATGGTTTTCTACTGATGACCGTATCTTACTGTCTGAGCTCCAAAAAGGTCTAGCTCGACCCAACACCATTGTGGCCAAGGATGGTAGTGGCCAATATAAAACAATTACAATCGTTATTAACCTATACCCTGAGAATCATCAAGGAAGATATGTTATATATGTTAAAATGGGTGTCTACCGTGAGTACATTACTATCGACTCTAAAAATAAAATTTTATTATACGGTGATGGTCCTACAAATACAATTATCACTAGAAACAAGAACGTTCATATTGGACTCAAATTACCCGAAACAGTCACATTTTCCACCTTTGGTGAAGACTTCATTGCCATATCAATTGCATTTGAGAATAAAGCTGGTCCAAAAGCTCAACAAGCAATAGCACTTTGTGTTGATGGTGATCACTCAGAATTTTTCCGGTGTGCATTTCTTGGTTATCAAGACACATTGTACACACGCAAGGGTCATCAATTCTATCGAAACTGTGAGATTTATGGAACCATTGATTTTATCTTTGTTAATGAAACAAACACTGAAAACTCGTACTTTGCTGAGTTTGGCAACATTGGACCCGGTGTCAATGCTACATCAATTGTTAAATGGGCAAAAGGTGTCATTACCAAAGATGAAGCTGTTAGATTCACTGCTGAAGAAAACTCTTACTTTGCTGAGTATGGCAATAGTGGACCTGGTGCCGATACTACATCAAGGGTAAAATGGGCAAAAGGTCTCATTACTCAAGATGAGGCTGCTAGATTTATTGCTGAACCATGGCTTAATGCTAGCACTTGGTTGCCTTTCACTGGTGTGCCATACAATAAAGGATTATAG 924 0.3874 MWEKKLPSLNGGLEWCLHLVALLKWIIKVPTWFSTDDRILLSELQKGLARPNTIVAKDGSGQYKTITIVINLYPENHQGRYVIYVKMGVYREYITIDSKNKILLYGDGPTNTIITRNKNVHIGLKLPETVTFSTFGEDFIAISIAFENKAGPKAQQAIALCVDGDHSEFFRCAFLGYQDTLYTRKGHQFYRNCEIYGTIDFIFVNETNTENSYFAEFGNIGPGVNATSIVKWAKGVITKDEAVRFTAEENSYFAEYGNSGPGADTTSRVKWAKGLITQDEAARFIAEPWLNASTWLPFTGVPYNKGL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01303 307 Gene3D - 246 307 IPR012334 -
Car08g01303 307 Gene3D - 48 208 IPR012334 -
Car08g01303 307 PANTHER PECTINESTERASE 206 249 - -
Car08g01303 307 PANTHER PECTINESTERASE 23 204 - -
Car08g01303 307 SUPERFAMILY Pectin lyase-like 248 305 IPR011050 -
Car08g01303 307 PANTHER PECTINESTERASE 249 306 - -
Car08g01303 307 Pfam Pectinesterase 53 206 IPR000070 GO:0030599|GO:0042545
Car08g01303 307 PANTHER PECTINESTERASE 206 249 - -
Car08g01303 307 PANTHER PECTINESTERASE 23 204 - -
Car08g01303 307 PANTHER PECTINESTERASE 249 306 - -
Car08g01303 307 SUPERFAMILY Pectin lyase-like 50 246 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01303 Car-Chr8 19584802 19586735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01303 26 307 Carbohydrate Esterase AT3G05620 35.366 5.19e-55 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01303 K01051 - mtr:MTR_5g083590 230.335