Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01289 ATGTTTGGAAATGGCTTGGTTATGGCTGAAGGCAGCAAATGGGTTCATCATAGACATGTTATAGCCCCAACATTTTCTCCACTTAATCTCAAATCAATGGCAAGCATGATGATTGGTTCCACAAGGAATATGACTGAAAGGTGGGTTTCCCAAATAAACTGTGGCCACCATGAAATTGATGTGGAAAGAGAACTTGTAGCAACTGCTGGAGAGATAATAGCAAAAGCAAGTTTTGGAATGGGAGATGAAAATGGAAAGAAAGTATTTGATCAACTAAGAGTTTTGCAAATGACCCTTTTTGAGACCAATAGATATGTGGGGGTCCCATTTGGAAAATTCTTCAATCTCAAGAAAACTCAAGAAGCCAAAAAAATTGGTAAAGAAGTTGACAAGCTGTTATTTTCCATCATAGAATCTAGAATGAATTCACATGATAAGATACATCATAAACAAGATTTGTTGGATTATTTGTTGAAAGAAAATAAAGAGTTGGATGGACAATTGGAGAAGGCATTTACCATGAGGGAATTGGTTGATGAGTGCAAGACATTTTTCTTTGGTGGATTTGAGACCACATCACTTTCAATCACATGGACTTTGCTACTTCTAGCTTTGAATGAAGATTGGCAAAACCAATTGAGAGATGAAATTAAAGAAGTGGTTGGCAATATTGAAGAACTTGATATCAACTTGCTTGCTGATTTAAAGAAGATGAAATGGGTGATGAATGAAGCACTTAGACTCTACCCACCATCTCCAAATGTGCAAAGGGAAGTTAAGGAAGACATTCAAGTAGATAATTTTAAGGTGCTTAAAGGGACCAACATTTGGATTGATGTTGTAGCAATCCATCATGACATGACATTATGGGGGAGTGATGCCAACAATTTCAAACCACAAAGGTTCATGAATGATGCCAATGGAGGATGCAACCACACAATGGGATACTTGCCTTTTGGTTTTGGAGGGAGAACATGTGTTGaatatcaccaccctgtagagcaaagagtcccaccattggacaatgtcccATCGTTGGACTTGTCCCACCGTTGGACAAATGCTCTTCAGAACTTCATGTTTAGTACTCCACCGTTGGACAAATGCCCTTACCGTTACCAAAGTTGTTTCTAG 1134 0.3651 MFGNGLVMAEGSKWVHHRHVIAPTFSPLNLKSMASMMIGSTRNMTERWVSQINCGHHEIDVERELVATAGEIIAKASFGMGDENGKKVFDQLRVLQMTLFETNRYVGVPFGKFFNLKKTQEAKKIGKEVDKLLFSIIESRMNSHDKIHHKQDLLDYLLKENKELDGQLEKAFTMRELVDECKTFFFGGFETTSLSITWTLLLLALNEDWQNQLRDEIKEVVGNIEELDINLLADLKKMKWVMNEALRLYPPSPNVQREVKEDIQVDNFKVLKGTNIWIDVVAIHHDMTLWGSDANNFKPQRFMNDANGGCNHTMGYLPFGFGGRTCVEYHHPVEQRVPPLDNVPSLDLSHRWTNALQNFMFSTPPLDKCPYRYQSCF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01289 377 Coils Coil 210 230 - -
Car08g01289 377 PRINTS E-class P450 group I signature 176 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01289 377 PRINTS E-class P450 group I signature 196 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01289 377 PRINTS E-class P450 group I signature 316 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01289 377 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 328 - -
Car08g01289 377 SUPERFAMILY Cytochrome P450 2 327 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01289 377 Gene3D Cytochrome P450 1 330 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01289 377 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 1 328 - -
Car08g01289 377 Pfam Cytochrome P450 3 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01289 377 PRINTS P450 superfamily signature 240 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01289 377 PRINTS P450 superfamily signature 187 204 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01289 377 PRINTS P450 superfamily signature 317 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01289 Car-Chr8 18948870 18987918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01289 1 327 Cytochrome P450 AT5G52400 53.963 1.18e-127 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01289 - - cam:101493095 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g01190 04 12233344 12236614 Car08g01289 08 18948870 18987918 PCT