Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01288 ATGAGGGAATTGGTTGATGAGTGCAAGACATTTTTCTTTGGTGGATTTGAGACCACATCACTTTCAATCACATGGACTTTGCTACTTCTAGCTTTGAATGAAGATTGGCAAAACCAATTGAGAGATGAAATTAAAGAAGTGGTTGGCAACATTGAAGAACTTGATATCAACTTGCTTGCTGATTTAAAGAAGATGAAATGGGTGATGAATAAAGTAATTAGACTCTACCCACCATCTCCAAATGTGCCAAGGGAAGTTAAGGAAGACATTCAAGTAGATAATTTTAAGGAAGACATTTGGATTGATGCCAACAATTTCAAACCACAAAGGTTCATGAATGATGCCAATGGAGGATGGAACCACACAATGGGATACTTGCCTTTTGGTTTTGGAGGGAGAACATCTGTTGGTTGGAACTTGACCTTCATGGAGTATAAGATAGTTTTAGCCCTACTTCTCTCTAAGTTTAAGTTTAAAGTATCCCCTAATTATCACCATTTTCCTACTATCATGTTGTCTCTAAGACCCTTTTTTTGTACTTCCTCTCATAGTTCAACCATTGTAGAATGTTAA 573 0.3682 MRELVDECKTFFFGGFETTSLSITWTLLLLALNEDWQNQLRDEIKEVVGNIEELDINLLADLKKMKWVMNKVIRLYPPSPNVPREVKEDIQVDNFKEDIWIDANNFKPQRFMNDANGGWNHTMGYLPFGFGGRTSVGWNLTFMEYKIVLALLLSKFKFKVSPNYHHFPTIMLSLRPFFCTSSHSSTIVEC 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01288 190 PRINTS P450 superfamily signature 14 31 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01288 190 PRINTS P450 superfamily signature 126 135 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01288 190 PRINTS P450 superfamily signature 67 78 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01288 190 SUPERFAMILY Cytochrome P450 2 175 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01288 190 Coils Coil 37 57 - -
Car08g01288 190 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 2 181 - -
Car08g01288 190 Pfam Cytochrome P450 2 95 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01288 190 Pfam Cytochrome P450 97 163 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01288 190 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 181 - -
Car08g01288 190 Gene3D Cytochrome P450 1 181 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01288 190 PRINTS E-class P450 group I signature 3 20 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01288 190 PRINTS E-class P450 group I signature 135 158 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01288 190 PRINTS E-class P450 group I signature 23 49 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01288 190 PRINTS E-class P450 group I signature 89 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car08g01288 190 PRINTS E-class P450 group I signature 125 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01288 Car-Chr8 18923666 18924735 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01288 2 178 Cytochrome P450 AT5G52400 52.821 3.01e-67 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01288 - - mtr:MTR_0025s0110 267.7