Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01280 ATGGCTCCAAAGCAGCCAAGTACAGGTCTTTTTGTTGGATTGAACAAAGGTCATGTTGTTACCAAGAAGGAGTTGGCTCCACGACCCTCAGATCGTAAAGGGAAAACAAGCAAACGAGTGCACTTTGTAAGGAACCTCATCCGTGAGGTTGCTGGCTTTGCACCTTACGAAAAGCGTATAACTGAGTTGCTTAAGGTTGGAAAGGATAAGAGGGCACTGAAAGTTGCCAAGAGAAAGCTTGGAACCCATAAACGTGCAAAGAAGAAGCGTGAGGAGATGTCTAATGTTCTCCGAAAGATGAGGGCTGGTGGAGCCGGTGATAAGAAGAAATAG 333 0.4595 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01280 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Car08g01280 110 MobiDBLite consensus disorder prediction 87 110 - -
Car08g01280 110 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
Car08g01280 110 MobiDBLite consensus disorder prediction 1 37 - -
Car08g01280 110 Gene3D 60S ribosomal protein L36 1 108 IPR038097 -
Car08g01280 110 MobiDBLite consensus disorder prediction 79 110 - -
Car08g01280 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
Car08g01280 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01280 Car-Chr8 18636123 18637757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01280 1 110 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 80.909 1.57e-58 174