Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01276 ATGGGTTTGGTGGATAAAGAATGCTCAGAAGAAGGTTTAGGTCTTCTTGAGCCTTCTGATCATGATATTATTGAAGCTGATCCTACTTGTAATTACCATAGGTATAAGGAAGTAATCGGGAAAAGAGCTTTCAAGATCGTTTTTAAGGCATTTGATGAAGTCAATGGACTCGAAGTTGTGTGGAGCCAAGTTCGGATTGATGAGGTATTACAATCACTTGGCAAACTAGTGAGGTTGTATTCCGAAGTCCATCTATTGAGGTTGTTGAAGCACAATAACATTGTAAGGTTCTACAATTCCTGGATTGATGACAAGCACAAGAATGTTAATATGATTACTGAGTTGTTCACCTCAGGGAGCCTTAAACAGTACTGTAAGAAACACAAGAAGGTCGACATGAGAGCTGTTAAACGATGGGAGAAGTATGCTCAGCTATATTCGGATATTAATTTTTTCCATTCAATCCATCTAAGTAAACGAAAATTAAATGTTGTATACGAAGCTGATCTTACAGGCTATACATACGAAAGACTTGCTATATCCATCAATCGCGAGTTTCTTTTCCAAAACATTTTGGTTCATTTGTATACATATCAAGCACCTAATGACATAAAGCAGCATGTGGAGATTGATCCACATGAAAATGAAAAGCTTTCGCAAGTTGAATTATTGGTTATTGATGAAGCAGCTGCTATTCCACTACCTATGAGCAAAGCCATATATCTGCTAAGAGCACAGAGGGCACAGGTGGTTGATGAAATGTTCAAGAACCAGAAATGTTACCATTCGTTTTGTTCTGAATGTGTAACAAAACATGTGGCAACAAAAATCTAA 834 0.3729 MGLVDKECSEEGLGLLEPSDHDIIEADPTCNYHRYKEVIGKRAFKIVFKAFDEVNGLEVVWSQVRIDEVLQSLGKLVRLYSEVHLLRLLKHNNIVRFYNSWIDDKHKNVNMITELFTSGSLKQYCKKHKKVDMRAVKRWEKYAQLYSDINFFHSIHLSKRKLNVVYEADLTGYTYERLAISINREFLFQNILVHLYTYQAPNDIKQHVEIDPHENEKLSQVELLVIDEAAAIPLPMSKAIYLLRAQRAQVVDEMFKNQKCYHSFCSECVTKHVATKI 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01276 277 SMART serkin_6 33 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01276 277 Gene3D Phosphorylase Kinase; domain 1 17 114 - -
Car08g01276 277 ProSiteProfiles Protein kinase domain profile. 33 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01276 277 Pfam Protein kinase domain 36 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01276 277 SUPERFAMILY Protein kinase-like (PK-like) 34 156 IPR011009 -
Car08g01276 277 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 154 - -
Car08g01276 277 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 4 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01276 Car-Chr8 18345520 18348824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01276 7 154 MAP Kinase Kinase Kinase AT3G18750 62.162 9.27e-59 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car08g01276 Pkinase 3.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01276 K08867 - cit:102628655 211.075