Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01246 ATGAAACGAAGGCTCAAGGTGGTCAAGAGGAAACTGCCTGAACCATCGACCCCAAACAAGCCCATAATAGTCATTTGTATACAGGAAACAAGACATGCATCCTACAACCAGAAAACATTTATTAATAATGGCCAAGCTGCTGAGAGTGGAACCATATGTTACCTACGGATATCCAGATTTAAAAGCATAAAGAAGCTAATTTACAAGAAGGGGCGTACGAAAATAGATAAGCAGAAAGTTCCTTTGACAGATAATAACATTATTGAGCAGGAATTAGGGAAGTTCGGTATTGTATGCATAGAAGACACGGTGCATCAAATTGACAATGTTGGTCCACACTTTAAGGAAGTTGTAAGATTTATGTGGCCCTTTGACCTCAACAAGCCAGCAGATGGATTGAAAGGATCGAAATCCTGA 417 0.3981 MKRRLKVVKRKLPEPSTPNKPIIVICIQETRHASYNQKTFINNGQAAESGTICYLRISRFKSIKKLIYKKGRTKIDKQKVPLTDNNIIEQELGKFGIVCIEDTVHQIDNVGPHFKEVVRFMWPFDLNKPADGLKGSKS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01246 138 SUPERFAMILY Ribosomal protein L30p/L7e 59 136 IPR036919 -
Car08g01246 138 PANTHER 60S RIBOSOMAL PROTEIN L7-1 58 137 - -
Car08g01246 138 PANTHER 60S RIBOSOMAL PROTEIN L7 58 137 IPR039699 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01246 Car-Chr8 17071043 17072135 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01246 60 134 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 56.000 4.55e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01246 K02937 - gmx:100306107 140.584