Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01243 ATGGCAAGTGAAATTGTCAAGAAACAAGAATCACTTAATCTCAAAATCACTAGCAAAAGCTATGTGAAACCTGAGGAAAATATTGGGGGAAAAAAGTGTCAATTGGTCACATTTGACCTACCTTACTTAGCTTTTTACTATAACCAAAAATTACTTTTTTACAAAGGTGATGACTTTGAAGGAATGGTTAAAAAACTCAAAGATGGGCTTAGTGTAGTTTTGAAAGAGTTTCATCAACTAGCTGGTAAATTAGGAAAAGATGAAGAGGGTGTTTTTATTGTTGAATATAATGATGAAATGCTTGGTGTTGAGGTTATTGAAAGTGTTGCTGATAAAATTGGTGTTGAAGATCTCACTATTGATGAAAGTAGTTCCATTTTGAAGGAATTGATTCCTTATAGTGGCATCTTGAATTTGGAAGGCATGCATAGACCCTTGTTGGCAATTCAGTTAACAAAGCTCAAAGATGGGCTTGCAATGGGCTTGGCTTTTAACCATGCTGTCTTAGATGGAACTTCCACATGGCACTTCATGACTACATGGGCCGAGATTTGCAGCGGTGCACCCACCACAACAGCCCAACCATTCTTAGAACGGACAAAAGCCCGAAACACACGTGTGAAGCTCGACCTCTCTGTTCCTGAGCCCGAAGGCCCACCACCATCAGCCAACGGTGGGGCAAAGTCCGAACCAAAATTAAGGGAAAAAATCTTCAAATTTTCTGaatcagcaatcgacaagatcaagtcaacaaccaacaaAACCCCTCCATCAAACGATTCAAAACCATTCTCAACATTTCAATCTCTATCCGCTCATATTTGGCGTCACGTGAGCCTTGCACGTGACCTAAAGCCCGATGACTACACAGTGTTCACTGTATTCATAGATTGTAGAAAACGAGTGGACCCACCAATGCCAGAGGCCTACTTTGGAAACCTAATTCACGCTATATTCACTGTCACAGCTGTTGGGCTTTTGTCGGCCCACCCACCAGAATTCAGCGCTTCTTTAATCCAAAACGCAATTTTAGCCCATGATGCTAAAGCTATTGATGAAAGAAACAAAGAGTGGGAGAATGCACCAAAGATTTTTCAATTCAAAGATGCAGGGATGAATTGTGTGGCAGTGGGAAGTTCACCTAGGTTTAAAGTTTATGACATTGATTTTGGATGGGGAAAGCCAGAAATTGTGAGGAGTGGGACTAATAATAAATTTGATGGGATGATTTATTTGTATCCAGGAAAAAGTGGAGGAAGGAGCATTGATGTGGAACTAACATTGAACCCTGAGGCTATGGGAAGGTTGGAGCAAGATAAGGAGTTTCTTATGGAGATATAG 1341 0.396 MASEIVKKQESLNLKITSKSYVKPEENIGGKKCQLVTFDLPYLAFYYNQKLLFYKGDDFEGMVKKLKDGLSVVLKEFHQLAGKLGKDEEGVFIVEYNDEMLGVEVIESVADKIGVEDLTIDESSSILKELIPYSGILNLEGMHRPLLAIQLTKLKDGLAMGLAFNHAVLDGTSTWHFMTTWAEICSGAPTTTAQPFLERTKARNTRVKLDLSVPEPEGPPPSANGGAKSEPKLREKIFKFSESAIDKIKSTTNKTPPSNDSKPFSTFQSLSAHIWRHVSLARDLKPDDYTVFTVFIDCRKRVDPPMPEAYFGNLIHAIFTVTAVGLLSAHPPEFSASLIQNAILAHDAKAIDERNKEWENAPKIFQFKDAGMNCVAVGSSPRFKVYDIDFGWGKPEIVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLNPEAMGRLEQDKEFLMEI 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01243 446 Pfam Transferase family 14 442 - -
Car08g01243 446 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 17 442 - -
Car08g01243 446 Gene3D - 220 439 IPR023213 -
Car08g01243 446 MobiDBLite consensus disorder prediction 210 231 - -
Car08g01243 446 Gene3D - 11 213 IPR023213 -
Car08g01243 446 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 17 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01243 Car-Chr8 16906813 16912168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01243 66 446 Monolignol Biosynthesis Gene Families AT5G48930 29.000 1.93e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01243 K19747 - gmx:100790669 748.429