Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01241 ATGGATGAGCACAAGAAGGTTGCAGATTTGATTTCAAGATTGAGGAGTATCACAAATCAGATGGCTGGTTGTGGTGACAAGTTGACTAAACAGAAATTATGTGAAAATATCTTGAGATCGTTGCATCCTAGAACTTTGGAAGTTGAGGAAGCTGGCAACATAATGATCAAAAGAAGAAATGGAAAAACAACAGAAAATGAGGGAGAATATGTGGTGCTGGTTGAACCAGAAGATGATGGTTCAAAGAAAGTTAATGATGTGGAGTTGAATGTAGCTCAAGAAGATCTAAAGAAAGCAAAGGAACAAATTATTCATGATGAGAAGGAAAAAACAAAAGCTATTGATGAGTTGAAAGAAGCACAGAAAGTGGCTGAGGAAGCAAATAAGAAATTCAAGGAAACATTGGTGGCTCCAAAATTGGCTAAAGATGAATCTGAGATTGAAAAGTTCCGAGTTGTTGAATTGGAACATGTTGGAATTGAAATTATGAAGAAGAAGGAAAAAGAATGGCAGAAAGAGCTTGGAAATGTGAGGAACGAGAAAGCAGCTGTGCATGCTACTGGTGTTCACACCTTTTGCGGTAAAGCAACTCATGTGATTGATGGTGCAATCACAAAAGAAATGATAGCTATTAAAGAAATGGTTGGTGGAACTATCGGTGTTGTTGGAAACAGTTTGAGTTTACTTATCATGACTTTGCTGTTCAGTCAAATGATTGATAGTTTTGGTATTAATCAGGGTAACACCACTGATGTTGTTGAACAATTGTCCAAGGTATCACTTCAATTATTTGGACCAAACAAGTTGGAAGAGAAAAAGGACTGCAAAATTTTGAAGTTCTTAGATGATATGTGGAATCCTTTATCATGGGTCATGGAAGGTGCTCCATTAATGGCAATTGCTTTGGCTAATGGTAGTGGAAGACCTCCTGATTGA 936 0.3729 MDEHKKVADLISRLRSITNQMAGCGDKLTKQKLCENILRSLHPRTLEVEEAGNIMIKRRNGKTTENEGEYVVLVEPEDDGSKKVNDVELNVAQEDLKKAKEQIIHDEKEKTKAIDELKEAQKVAEEANKKFKETLVAPKLAKDESEIEKFRVVELEHVGIEIMKKKEKEWQKELGNVRNEKAAVHATGVHTFCGKATHVIDGAITKEMIAIKEMVGGTIGVVGNSLSLLIMTLLFSQMIDSFGINQGNTTDVVEQLSKVSLQLFGPNKLEEKKDCKILKFLDDMWNPLSWVMEGAPLMAIALANGSGRPPD 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01241 311 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 87 183 - -
Car08g01241 311 PANTHER WEB FAMILY PROTEIN-RELATED 87 183 - -
Car08g01241 311 Coils Coil 160 180 - -
Car08g01241 311 Coils Coil 89 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01241 Car-Chr8 16846247 16848110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01241 261 311 Primary Pumps ATPases AT2G07560 74.510 5.13e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01241 - - cam:105851219 136.732