Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01232 ATGGATCCTAATGGTTCTATTGATGATAAGTGTGAAAATAGACTGTACATTGGCAATCTTGATCTCAGAATTACAGAAGCTGCTCTACTCAAAATGTTTTCTCCTTATGGAAAGATTGTGACCGAAGATTTCTTGTGGCACACCCGTGGCCCGAAACGTGGCGAACCACGGGGTTTCGCTTTTATCCAGTATAGCACAAAAGAGGAAGCTAAATTAGCCAAGGAGAAAATGCATGGGAAGTTAGCTTGCGGCCGGCCATTAGTTGTTCGTCTTGCGAGTGAGAGATACGCGCTGGAAACAGCAGATAGCTCTAAAAAAGCAACAGGTGAAGGGCACAAGTTGCATCTCACTAGTGGCTCGGGACAGACAAGTCGTAGTGCGAAAATAGCCGCAATAAAGAACAAGCTGAAGTCTTTAGAGGAGGATAACTCTAAGATCAAGAAACAGAAGAAGGGTGACAATATATCTTGA 471 0.4374 MDPNGSIDDKCENRLYIGNLDLRITEAALLKMFSPYGKIVTEDFLWHTRGPKRGEPRGFAFIQYSTKEEAKLAKEKMHGKLACGRPLVVRLASERYALETADSSKKATGEGHKLHLTSGSGQTSRSAKIAAIKNKLKSLEEDNSKIKKQKKGDNIS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01232 156 MobiDBLite consensus disorder prediction 100 127 - -
Car08g01232 156 PANTHER RNA-BINDING PROTEIN 18-RELATED 5 151 - -
Car08g01232 156 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 5 151 - -
Car08g01232 156 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 13 94 IPR000504 GO:0003723
Car08g01232 156 SUPERFAMILY RNA-binding domain, RBD 7 97 IPR035979 GO:0003676
Car08g01232 156 CDD RRM_RBM18 14 93 IPR039157 -
Car08g01232 156 SMART rrm1_1 14 90 IPR000504 GO:0003723
Car08g01232 156 Coils Coil 129 149 - -
Car08g01232 156 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 15 87 IPR000504 GO:0003723
Car08g01232 156 Gene3D - 10 107 IPR012677 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01232 13 95 Eukaryotic Initiation Factors Gene Family AT1G71770 37.349 6.70e-11 57.8