Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01231 ATGAAGACTCAAAAGTTGATTAAACTCTCCAttcttctaattttcattccattttcattatcttcattcattCCTATAAATAACTTTCTTCTCAATTGTGGATCAAACACAAATGCTTCCATTTTCAATAGACTTTTCATTGGTGATTCTACTAAACAAGATTCAATTTTTCTCTCTTCACACAAATCAATTTCACTCACCAACCAAAACCCATCTTCAAATTTACCTACTTTGTATCAAACAGCAAGAATTTTCACCAACAATGGAGGAACCTACAAATTCATCTTGAGAAAAAATGGTACCCTTTTTGCTCGTTTTCATTTCTCATCTTTTAAGGGTCATGGTTTTGATCTTAAAGATGCAAACTTTAGTGTTTTTGTTGGTGGAAAATTGGTTTTAAGAAACTTCAATTTCCATTTCAAGATtagtagtaataataataatgatgatgatgatgtaattatTAAAGAGTTTATTTTGAAAGTGGTGTCAAATTTTGTTGAAATTGTGTTTAGACCTGTTAATGATTCTTGTTTTGGATTTGTTAATGCTATTGAAGTGTTTTCTGTTCCTGAAGATTTTGTTGTTGATTATGGAGCTAGGTTTATTGGTCCTTATGGTGTTGTTGAGTATAAGAATCTTTCTAATCAAGTTTTAGAAACTATTCATAGGATTAATGTTGGAGGATTGAAATTAACACCTTTTAACGATACCCTTTGGAGGACTTGGATTCCTGATAAGGAATTTTTGGTTTTTAAGGATTCGGTTAAGACGGTAGTGAGCACTCACACACCGAATTATCAGAAAGGAGGCGCGACTCGAGAGATCGTGCCCGATAATGTTTACATGACTGCTCAAGAGATGAATAGGAATCAATCCATTTTAGCTTCAAAATTTAACATAACATGGAATTTTCCTGTGGAAAATGGTGGTGTTCGACATTTAGTTCGGTTGCATTTCTGCGATATTGTTAGTCCTTCGCTTAATTTGCTCTACTTTAATGTTTATATCAACAGATATTCTGCGTATAAGGACGTTGATTTGTCGTCCCTTACATTCCATACGCTTGCTTCTCCAATCTATGTTGATTTCGTTGTAGATTCTAATGATTCGGGTGTCATTCAAATAAGTGTTGGCCCTTCTGATCTTAGTAGTTCTATGAGGATAAATGCTATACTCAATGGCGCCGAGATAATGAAATTCGTCAATGTTACAGATTTAGATTCACACGTTTCTTCTCAGAAGACAAGGTTTTTGTTGGTTTTGGTGTGTTCGATTGTTGGAGGAATTGttattttagttttagttatagcgttttttctagttCGTCTCAGTCGCGGAAAGAAGAAACTGAAACAAAGGACAGTTGAAAGTGTAGGATGGACGCCTTTAGGCGTGTTCGGAGGAAGTTCGCTTAGTCGAATGTCTGAAGGATATTTTGGATTGAACAAAATCCCTTTTGTTGATATAAAATTAGCAACTAACAATTTTGATAAAAGTCTAATTATAGGAGCTGGTGGATTTGGTATGGTTTACAAAGGAGTGTTGAAAGACAATGTGAAAGTTGCTGTCAAAAGAGGTATGCCAGGATCAAGACAAGGTCTACCAGAATTCCAAAGCGAGATAACAATATTATCGAAGATTCGCCATCGCCATCTTGTTTCGCTAGTTGGATTTTGCGAAGAAAATTCGGAAATGATCCTTGTCTATGAGTATGTTGAAAAAGGCCCACTCAGAAACCATTTATATGGTTCAGAAGGATTTGAACCTTTGTCGTGGAAGAGACGTCTCGAGATATGCATCGGTGCTGCTCGAGGTCTACATTATCTTCACACTGGTTTTACACAAGGAATCATCCATCGCGACATTAAATCGACCAACATTTTGCTCGACGAAAATTATGTTGCTAAGGTTGCTGATTTTGGTCTTTCAAGATCCGGACCTTGTATTGATGAAACTCATGTGAGTACAAATGTCAAAGGTAGTTTTGGTTATCTCGATCCGGAGTATTTTCGCAGGCAACAACTTACTGATAAATCAGATGTTTATTCGTTCGGAGTTGTGCTATTCGAAGTTCTTTGTGCTAGACATGCTGTTGATCCGCAACTCGATAGGGAACAAGTGAATTTAGCAGAATGGTCGCTTAAATGGCAGAAAAAAGGTATGTTAGAGCGTATCATCGATCCTTACCTCGTCGGTAAGATCAACGAAAGCTCGTTGAAGAAATTCAGCGAAACAGCTGAGAAATGTTTGGCTGAATATGGTGTTGATAGACCAAGTATGGGTGATGTGTTATGGAATTTGGAATATTCACTTCAGCTGCAAGAAAGTGATCAAGAAGTGAATGAAATAATTCATGAGAATCGTCCAAGAAGCATAAGAATAGAAAGAGATTATGACAACAATATTTATTCAGATATAAGTGCTACCAAAGTTTTTTCTCAACTAATGCATAGAGAAGGAAGATAG 2469 0.3499 MKTQKLIKLSILLIFIPFSLSSFIPINNFLLNCGSNTNASIFNRLFIGDSTKQDSIFLSSHKSISLTNQNPSSNLPTLYQTARIFTNNGGTYKFILRKNGTLFARFHFSSFKGHGFDLKDANFSVFVGGKLVLRNFNFHFKISSNNNNDDDDVIIKEFILKVVSNFVEIVFRPVNDSCFGFVNAIEVFSVPEDFVVDYGARFIGPYGVVEYKNLSNQVLETIHRINVGGLKLTPFNDTLWRTWIPDKEFLVFKDSVKTVVSTHTPNYQKGGATREIVPDNVYMTAQEMNRNQSILASKFNITWNFPVENGGVRHLVRLHFCDIVSPSLNLLYFNVYINRYSAYKDVDLSSLTFHTLASPIYVDFVVDSNDSGVIQISVGPSDLSSSMRINAILNGAEIMKFVNVTDLDSHVSSQKTRFLLVLVCSIVGGIVILVLVIAFFLVRLSRGKKKLKQRTVESVGWTPLGVFGGSSLSRMSEGYFGLNKIPFVDIKLATNNFDKSLIIGAGGFGMVYKGVLKDNVKVAVKRGMPGSRQGLPEFQSEITILSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLRNHLYGSEGFEPLSWKRRLEICIGAARGLHYLHTGFTQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCIDETHVSTNVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARHAVDPQLDREQVNLAEWSLKWQKKGMLERIIDPYLVGKINESSLKKFSETAEKCLAEYGVDRPSMGDVLWNLEYSLQLQESDQEVNEIIHENRPRSIRIERDYDNNIYSDISATKVFSQLMHREGR 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01231 822 CDD STKc_IRAK 503 769 - -
Car08g01231 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Car08g01231 822 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Car08g01231 822 SMART serkin_6 497 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01231 822 Gene3D Transferase(Phosphotransferase) domain 1 573 792 - -
Car08g01231 822 SUPERFAMILY Protein kinase-like (PK-like) 480 766 IPR011009 -
Car08g01231 822 Gene3D Phosphorylase Kinase; domain 1 470 572 - -
Car08g01231 822 Gene3D - 218 402 - -
Car08g01231 822 Gene3D - 28 191 - -
Car08g01231 822 Pfam Malectin-like domain 31 400 IPR024788 -
Car08g01231 822 PANTHER OS07G0166700 PROTEIN 16 782 IPR045272 GO:0004714|GO:0006468
Car08g01231 822 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 782 - -
Car08g01231 822 Pfam Protein tyrosine and serine/threonine kinase 502 764 IPR001245 GO:0004672|GO:0006468
Car08g01231 822 ProSiteProfiles Protein kinase domain profile. 497 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01231 Car-Chr8 16594921 16597666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01231 9 822 Receptor kinase-like Gene Family AT3G46290 47.356 0.0 700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Car08g01231 Malectin_like 2.7e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01231 - - gmx:100814974 1166.76