Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01214 ATGGTATCAAAAAACCCGAACCCGCCCGAAGGTTTTTGCTTGGATCCGACTGGTATGGGTTTACCGGGTTTTGGCCCCTTCGCCTCCGTCTCCGCCGCCGTGAACTTGTCGGAGGATGCCTCCAAGAAAGTTCGGAAGCCCTATACTATAACCAAGTCTAGGGAGAATTGGACCGAACCTGAACACGACAAGTTCCTTGAAGCTCTTCAACTATTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACTGTTATACAGATACGTAGCCATGCACAAAAATATTTTCTAAAAGTTCAGAAGAGTGGGGCCAATGAACATCTTCCTCCACCCAGGCCTAAAAGAAAAGCTGCTCATCCATATCCTCAAAAAGCTTCCAAAAGTGCTCCTGTACTCTCACAAGTACCGGGATCTTTTCAGTCTTCACCACCTTTGCTTGAACCTGGATATATACTGAAGCATGAATCCATACCAATGCTTGAAACTCCTATTATGAACACTGTGGTGTCTTCCTGGTCGAACCACACGTTGCAAAATACAAATTTATTGCATGCGCCAAAAGTGAATAACTCCTGCAGTAGCACTGAAAGTACTCCTAAAGTGCGGCCGGTTGGTGAATCTAATAGTCAAGAGAATAAAAGCCTTCCATTGAGAGTTCTTCCAGACTTTTCTCAAGTATACAACTTCATTGGCAGTGTATTTGACCCAGAAGCAACTGAGCATCTACAGAAACTTAAACAGATGGACCGTATAGATGTTGAGACGGTGCTTCTGTTGATGAGAAACCTGTCTATCAATTTAACTAGCCCAGATTTCGAGGATCATAAAAAGCTACTTTCGTCCTATGAAGTCGATGTCGAGACAAATAACTATATCAATCCGATACATGATGATCAATTGAAGAGTGCTACTACTTAG 927 0.4293 MVSKNPNPPEGFCLDPTGMGLPGFGPFASVSAAVNLSEDASKKVRKPYTITKSRENWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGANEHLPPPRPKRKAAHPYPQKASKSAPVLSQVPGSFQSSPPLLEPGYILKHESIPMLETPIMNTVVSSWSNHTLQNTNLLHAPKVNNSCSSTESTPKVRPVGESNSQENKSLPLRVLPDFSQVYNFIGSVFDPEATEHLQKLKQMDRIDVETVLLLMRNLSINLTSPDFEDHKKLLSSYEVDVETNNYINPIHDDQLKSATT 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01214 308 PANTHER SWI/SNF COMPLEX-RELATED 3 294 - -
Car08g01214 308 SMART sant 53 101 IPR001005 -
Car08g01214 308 SUPERFAMILY Homeodomain-like 48 104 IPR009057 -
Car08g01214 308 Pfam Myb-like DNA-binding domain 54 99 IPR001005 -
Car08g01214 308 MobiDBLite consensus disorder prediction 191 215 - -
Car08g01214 308 CDD SANT 56 99 IPR001005 -
Car08g01214 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 103 IPR017930 -
Car08g01214 308 PANTHER PROTEIN REVEILLE 6 3 294 - -
Car08g01214 308 ProSiteProfiles Myb-like domain profile. 49 99 IPR001005 -
Car08g01214 308 Gene3D - 56 104 - -
Car08g01214 308 ProSiteProfiles SANT domain profile. 52 103 IPR017884 -
Car08g01214 308 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 52 101 IPR006447 GO:0003677
Car08g01214 308 MobiDBLite consensus disorder prediction 104 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01214 Car-Chr8 14248853 14256195 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car08g01214 Myb_DNA-binding 4e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01214 - - gmx:100783949 471.855