Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01176 ATGACTCCAGAATATGCAATGCATGGTTATTTGACTGATAAAGCAGATGTCTATAGTTTTGGAATTGTGGCCTTAGAAATCATACATAGAAAGAACAATACCACTCTTCGACAAAAAGAAGAAGCATTTCATCTTCTTGATTGGGCACATCTCTTAAAAGAGAAAGGTAATCTAATAGAGCTAGTTGATAGAAGATTGGGTACAAATTTCAACAAAGAGGAAGCAATGGTGATGATAAATGTGACCCTCTTATGCACTAATGTGACTTCAAATCTTAGGCATGCTATGTCTTCAGTGGTAAGCATGCTTGAAGGTAAAATAGATATTCAGGAAGTGTTTACAGAGTCAAGTGAGGTATTGGATGAGAAGAAAATTGAAGCAATGAGACAATATTACCAAGAACATAATATTCAAACGGAAGAGCCATAG 429 0.3543 MTPEYAMHGYLTDKADVYSFGIVALEIIHRKNNTTLRQKEEAFHLLDWAHLLKEKGNLIELVDRRLGTNFNKEEAMVMINVTLLCTNVTSNLRHAMSSVVSMLEGKIDIQEVFTESSEVLDEKKIEAMRQYYQEHNIQTEEP 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01176 142 Pfam Protein tyrosine and serine/threonine kinase 1 48 IPR001245 GO:0004672|GO:0006468
Car08g01176 142 Gene3D Transferase(Phosphotransferase) domain 1 1 132 - -
Car08g01176 142 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 130 - -
Car08g01176 142 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 130 - -
Car08g01176 142 SUPERFAMILY Protein kinase-like (PK-like) 1 114 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01176 Car-Chr8 13118121 13118783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01176 1 141 Receptor kinase-like Gene Family AT1G53440 56.738 2.21e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car08g01176 PK_Tyr_Ser-Thr 3.6e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01176 - - cam:101501658 258.455