Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01163 ATGGAACACCAAACTACACCTTCGTCTTCTCACAATCCCTCTCAGTTGTCATGGATTAACTTGTCGAGGAATTTATTGTTAGCATATCAAAGCTTTGGTGTAGTATATGGAGATCTAAGCACATCACCTCTCTATGTTTATACAAGCACATTTAAAGGAAAGTTTAAGAACCACCATGATGAAGAAACTATCTTTGGTGTTTTTTCATTGATTTTCTGGACGCTTACGTTAATACCTTTGCTTAAATATGTATTCATCATATTGAGTGCTGATGATAATGGTGAAGGTGGGACATTTGCTCTATATTCACTGCTCTGTAGGCATGCCAAATTTAATTTGCTCCCCAATCAACAGGCAGCTGATGAAGAGCTGTCGTCCTACAAATATGGTCCGTCGTCACCACAGATGGTTGCCTCGTCACCGCTCAAGATGTTTTTGGAGAAGCACAAAAGGTCAAGAACAGCTCTGCTTGTTGTTGTACTATTTGGTGCTTCCATGGTCATAGGTGATGGTGTACTTTCTCCAGCTATTTCAGTTCTGGCATCAGTATCAGGATTAAAAGTTACAAAAACGAAATTCAATGACGGTGAACTTGTCCTGCTAGCATGTGTCATACTGGTTGGCTTGTTTGCTCTCCAACATTGTGGAACACACAGAGTTGCATTTATGTTCGCACCAATTGTAATCATCTGGCTTCTATCGATTTTTTTGGTTGGCATCTATAATACAATACACTGGAATCCGAAAATAGTCTATGCTATCTCCCCACAATATATTATCAAGTTCTTCATCAAGACTGGTGCAGAGGGTTGGATTTCTCTTGGAGGGATACTTCTCTGTATCACTGGATCAGAAGCTATGTTTGCAGATCTTGGTCATTTTACTGCTTCGTCAATAAGGATTGCATTTGCTTTTGTTATATACCCATGTTTGGTAATGCAATATATGGGACAAGCAGCTTTTTTGTCTAAAAACCTTAAGTCTGTTCATAACAGTTTTTATGACTCACTACCTGGACCTGTATTTTGGCCGGTATTTGTTATTGCTACAATGGCAGCCATTGTTGGAAGTCAAGCTACTATCACTGCGACTTTCTCCATCGTCAAGCAGTGTCATGAACTTGGTTGCTTTCCCCGTGTCAAAGTTGTTCACACCTCAAAACACATATTCGGACAGATCTACATCCCAGAAATAAACTGGATACTTATGGTCCTGACACTTGCTGTAACCATTGGATTTCAGGACACAACCTTAATTGGAAATGCTTACGGACTTGCTTGTGTGACGGTAATGTTTGTAACTACATTTCTAATGGCACTAGTCATAATCTTTGTCTGGCAGAAAAGCGTCCCGATTGCTACGATATTCCTTTTGTTCTTTTGGGTGATAGAAAGTGTGTATATTTCAGCAGCATTCCTAAAAGTGCACCAAGGAGGATGGGTTCCTCTTGTCTTGTCCTTCTTCTTTTTGGTTGTTATGTATGTATGGCATTACGGTATTCGTCGGAAGTACAAATATGATCTACACAACAAAGTTTCATTGACATGGTTACTAGGTTTAGGGCCTAGTCTCGGAATTGTACGTGTCCCAGGGATAGGTCTCATCTACTCGGAACTTGCCACAGGAATACCTGTGGTATTTACTCACTTCGTAACTAACCTCCCTGCATTTCACAAGGTGGTTGTTTTTGTTTGTGTAAAATCGGCTCCCGTTCCATATGTCTCACCTGAAGAGCGTTTCCTGATCGGTCGAGCTTGTCCTAGACCATATCGAATGTATAGGTGCATTGTTCGATATGGGTACAAGGACATTAAAAAGGATGATGGGGACTTTGAGAACCATCTCATACAAAATATAATGGAGTTTATCCAGATGGAGGCAGTGGAACCACAACTCTCGAGTTCCGAAACTTCTTCTTTCGATGGGAGGATGGCTGTTATAGGTACCAGAAGCTTAGAATCAACTGCAAGCTTGATATTTTCTGATCAAGAAGATGTCAGTGGTATCGACGAAAGCATCCCTAGTAGCAGATCTGTAACCCTGCGACTTTTGCAATCTAGTTTCGACGATGAAAACCCACAAGTCAGAAGGCGTCGAGTAAGATTTCAAGTGCCTAACAATCCTGGGTTGGATCACGCCGTTAGAGAAGAGCTTTTAGATTTAATCCAAGCCAAGGAGGCTGGAGTTACGTATATAATGGGATATTCGTCTATAAAGGCGATGAAATCATCGTCATATTTGAAAAAGCTTGTGATTGATATTGGATACTCATTTCTTCGGAAGAATTGCAGGGGTCCAGCTGTAGCTCTCAACATTCCTCACATCAGTCTTATTGAAGTTGGAATGATATATTATGTCTAG 2361 0.407 MEHQTTPSSSHNPSQLSWINLSRNLLLAYQSFGVVYGDLSTSPLYVYTSTFKGKFKNHHDEETIFGVFSLIFWTLTLIPLLKYVFIILSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSPQMVASSPLKMFLEKHKRSRTALLVVVLFGASMVIGDGVLSPAISVLASVSGLKVTKTKFNDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIFLVGIYNTIHWNPKIVYAISPQYIIKFFIKTGAEGWISLGGILLCITGSEAMFADLGHFTASSIRIAFAFVIYPCLVMQYMGQAAFLSKNLKSVHNSFYDSLPGPVFWPVFVIATMAAIVGSQATITATFSIVKQCHELGCFPRVKVVHTSKHIFGQIYIPEINWILMVLTLAVTIGFQDTTLIGNAYGLACVTVMFVTTFLMALVIIFVWQKSVPIATIFLLFFWVIESVYISAAFLKVHQGGWVPLVLSFFFLVVMYVWHYGIRRKYKYDLHNKVSLTWLLGLGPSLGIVRVPGIGLIYSELATGIPVVFTHFVTNLPAFHKVVVFVCVKSAPVPYVSPEERFLIGRACPRPYRMYRCIVRYGYKDIKKDDGDFENHLIQNIMEFIQMEAVEPQLSSSETSSFDGRMAVIGTRSLESTASLIFSDQEDVSGIDESIPSSRSVTLRLLQSSFDDENPQVRRRRVRFQVPNNPGLDHAVREELLDLIQAKEAGVTYIMGYSSIKAMKSSSYLKKLVIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01163 786 Pfam K+ potassium transporter 29 603 IPR003855 GO:0015079|GO:0016020|GO:0071805
Car08g01163 786 PANTHER POTASSIUM TRANSPORTER 4 20 786 - -
Car08g01163 786 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 786 IPR003855 GO:0015079|GO:0016020|GO:0071805
Car08g01163 786 TIGRFAM kup: potassium uptake protein 27 786 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01163 Car-Chr8 12625473 12631318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01163 8 786 Inorganic Solute Cotransporters AT3G02050 74.297 0.0 1182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01163 K03549 - gmx:100790329 1333.55