Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01162 ATGGCCTTAAATAAGAAAGGAAATTTGTTAGGCTCTAACATTGGTGAGTTTCCTCAATACACTAACCGAGAATTACCCGGCGGTGTTACAAATGTACATAGTAATAATAATATCCCTAAGGTTGGCGAAAAAGTTTCGGCGAATTTTGTTCATGATGGTAGAGTTCCAGTTCCTGATATATGTCGAAATCGTGAGAATGGACATGTGAGATATGAAGATCTTACCAAAGTATTAGGGTTGAAGAGAATGGATTCTGAGAGTTCTTCTGATATAGGTGACTTTATTATTCCTAAGAAACATCCAGTGGCATTAGAGATGGAAAATGGGGCGGCTTGTCCCAACATTTCGATCAAAACTCATAAGAGAGAAGGCGAAAGCGGCCGTGCCTTGAGGAAGACGTTTAGTGAATCGATTAGTGATCAACAAAGTACTAGTCATAGACACGTAAGATCTCACTCCAACGGGTTTAATGGTTCTGCAATTTTAGACGATTCTTTGTTTGGGAAAATGAAGTTTCTTTGCAGCTTCGGCGGGAAAATTTTACCAAGGCCCGGCGATGGGAAGCTTAGATATGTAGGGGGAGAAACCCACATTATATCGATTCGAAACGATATTTCGTGGCAAGAGCTTATGAATAAGACCTTAGGTATTTGCAGTCAACCTCACACGATAAAATACCAGCTTCCCGGGGAGGATCTTGATGCTTTAATATCGGTTTCCTCTGACGAGGATCTTCAAAATATGATAGAGGAATATCATGGACTTGAAAGTCATGAAGGTTCTCAAAAACTTCGAATATTTTTAGTTCCTTTCGGTGAATCTGAAGAGACATCGTCAAATGAGGCAACCAATGTTCTCCCCAATGATCCTGATTACCAATATGTTGTTGCTTTAAATGGCTTAATTCTAGACCCTAGTCCTACTAAGAAAAACATTGGTTGTGGTCAGAGTATGACGACAAATGAAGCAAATCAATTGGGGACTGGTTTGAATTTTACTCCGTCTTTTCAGAAACCACCCCCAATTGTGTCTTCTCCTTTTGATGGAATTTTGAATGAGTCCCTAAATCCGAAAAGTCCCTTGCGAATTTCTCCTACTCCGGTTCAAGTTGCGGGTTCTAGTACAGGTTATATTCAATTGCTTGGTAACAACTCGTGTGCGGGAAGTATCGAGAGCAATGCCTCGTTTGTTACTGCTCAGCTACACTCGGGGAACTCGAGCATAAGCACTTCTGATTGCAGATACACTCAACAAGCAGCTGTTACTTTGTTAAATGACGGTCAACATGGTGATGTTGGTCAGCTCAATGGACAGTATTTCGACAACTACAATCCGTCCGGCAAGGAATTCACGAGTCCTATATATGTTAGCCCTAGTAATGGTTACGGTGATGAAGTTTTTGGTGGAACCTTGCATAACAAGGAAAGAATATTATACTCTGAAAATCCTCTTTCATGCTTGGAGGATCCGATCTGTCAAAAATCCGAATCATATGGAACAACTAATGATGACCCCCCGCACGGGATGGCTCACACTTTTTCAGATTCGCAGTTGCACGAAAGCGGAGCAAGGTCACAGCAAGGAATTAGCCAATCTATCTCATTGAACCTTGAAAAAGTGCAATTATCTTCAATGTTAGTCTCTAGTGGTGTCTCACAAGTGAACCTTATGGAGGGTCAACACGATCCCTTCCTCCATCATCCTCGAATACAAAGTATGATACCGAAAGTGGAGTCATCTGAGATGCACAGACGGCAAGGTATGATGTCAACTTCTCCTTACTCAGAATCAGTAGGAATGAATGATCTTATTGATAAGGATAGCAATTTAACCGAAAAAAAGTACCTCATTGCTCAAACAGACTTAAGTGGATCCGGGTTTGTAGACAAAGACGTGCAGGAAAATTCTTTGAAATCGGAAAGGATGATGATAATAGAAGAAAAGAATCCTATTCCCAAGAAGGATAATAACAAGGTTTATGAGGGAAATTCAACCATCAATTACACGGGACTTGTGAATGAATTGCATCTTTTGGATTCCTTCCCTACAAATAACATAAGTGCTAAGATTAGTATGCAAAAGAATCGGGAACAACCGTTTGGGGACACACATCCTTTGCCGTCAGGCATGACAGGATTCTCTCTAAACAACCTTGTGGACAAGACGAATGATGGCAAGAAATGTGGTTTGGCTGAAGGTCTGAATGGTGAACAAGGAATTGATTTTTCAGCCAGAAACATCGATCTAGATGCTCCGATTTTTCAACTTGCAGAAAGCTTTCGTGACAAAAGTGCTGTCAGAGATCATACTTTCGAGTTTTCCTTTGATACAGATACTCTTAAATCTGCACAAATCCAGCCTTCTCAGAATCAAATCAACGCAGCAGGGACAGTAAACTCAGAAAGTGTGTATCCTACTGTATTGCACGATGATATATGTCCGCGATTGAACTTGCGAGTCGATGATGACCTGGATAATTCAAGCAAGAATACTTTTTCTTTTAAAAAGGAACCTTATTTTCTTGATGACTTGATTTCAACCACTGACCAAATGGTTGATCAGTTTAAACATGAACTCTCTTCCTCTGGACTGTCAAAAGTTGAAGATTCAATTTCAGGACGATCAAAAAATTCAGAAAGGTTTAATGATGCAAATCGAGCGGAGCCGTCTTTTGTAGTAGAAGATGTGACTGGTGATTTTTCTTCACGTAGTAAGTCTTCACATGTTTTTGATGAAGTTGGAAGTGATTTATCTCCGTCTACTACGGAAGTAGAGAGCACCGTCCCAGAATCTGATCCCGAGGATTTTAAAGACGATCAAACCGACATGAATGAATTCCTTTCTGATGCAATGATAGCAGAAATGGAGGCCAGCATATATGGTTTGCAGATCATTAGGAATGTCGATCTTGAAGAACTCATGGAGTTAGGATCTGGTACCTATGGAACTGTTTATCATGGAAAATGGCGGGGAACGGATGTTGCAATCAAGAGAATTAAAAAGAGCTGCTTTGGAGGGAGATCTTCCGAGCAAGAACGGTTGGCAAAAGACTTCTGGAGAGAGGCACAGATTCTGTCAAATCTTCACCATCCCAACGTTCTCGCATTTTATGGAATAGTACCGGATGGTGCTGGTGGAACCTTAGCAACTGTAACAGAATATATGGTTAATGGTTCCCTTAGGCATGTCCTTGTCAAGAACAACAGATTACTAGATTGTCGTAAAAAGCTTATAATTGCCATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAGAATATTGTTCATTTTGATTTGAAGTGTGATAATTTGCTTGTTAATCTAAGGGATCCCCAACGACCGATATGCAAGGTTGGAGATTTTGGATTATCAAGAATAAAACGTAATACCCTTGTATCTGGCGGTGTACGAGGAACCCTTCCATGGATGGCACCAGAGCTGTTGAATGGTAATAGCAGCCGAGTTTCCGAAAAGGTTGATGTTTTCTCATTTGGCATCTCAATGTGGGAGTTATTGACAGGAGAGGAACCTTATGCAGATATGCATTGTGGTGCCATTATTGGGGGTATTGTAAAGAACACTCTTCGACCACCTATTCCAGACCGATGCGATCCCGAATGGAGGAAGCTTATGGAAGAATGTTGGTCACGTGACCCTGAATGTCGGCCATCGTTCACCGAGATAACCAACCGGTTAAGATCTATGTCTATGGCACTTCAAGGAAAGGGGAATTATCATGCATGGCAGTTGAGACCTAGTAATAATGCTTTTTAA 3777 0.4093 MALNKKGNLLGSNIGEFPQYTNRELPGGVTNVHSNNNIPKVGEKVSANFVHDGRVPVPDICRNRENGHVRYEDLTKVLGLKRMDSESSSDIGDFIIPKKHPVALEMENGAACPNISIKTHKREGESGRALRKTFSESISDQQSTSHRHVRSHSNGFNGSAILDDSLFGKMKFLCSFGGKILPRPGDGKLRYVGGETHIISIRNDISWQELMNKTLGICSQPHTIKYQLPGEDLDALISVSSDEDLQNMIEEYHGLESHEGSQKLRIFLVPFGESEETSSNEATNVLPNDPDYQYVVALNGLILDPSPTKKNIGCGQSMTTNEANQLGTGLNFTPSFQKPPPIVSSPFDGILNESLNPKSPLRISPTPVQVAGSSTGYIQLLGNNSCAGSIESNASFVTAQLHSGNSSISTSDCRYTQQAAVTLLNDGQHGDVGQLNGQYFDNYNPSGKEFTSPIYVSPSNGYGDEVFGGTLHNKERILYSENPLSCLEDPICQKSESYGTTNDDPPHGMAHTFSDSQLHESGARSQQGISQSISLNLEKVQLSSMLVSSGVSQVNLMEGQHDPFLHHPRIQSMIPKVESSEMHRRQGMMSTSPYSESVGMNDLIDKDSNLTEKKYLIAQTDLSGSGFVDKDVQENSLKSERMMIIEEKNPIPKKDNNKVYEGNSTINYTGLVNELHLLDSFPTNNISAKISMQKNREQPFGDTHPLPSGMTGFSLNNLVDKTNDGKKCGLAEGLNGEQGIDFSARNIDLDAPIFQLAESFRDKSAVRDHTFEFSFDTDTLKSAQIQPSQNQINAAGTVNSESVYPTVLHDDICPRLNLRVDDDLDNSSKNTFSFKKEPYFLDDLISTTDQMVDQFKHELSSSGLSKVEDSISGRSKNSERFNDANRAEPSFVVEDVTGDFSSRSKSSHVFDEVGSDLSPSTTEVESTVPESDPEDFKDDQTDMNEFLSDAMIAEMEASIYGLQIIRNVDLEELMELGSGTYGTVYHGKWRGTDVAIKRIKKSCFGGRSSEQERLAKDFWREAQILSNLHHPNVLAFYGIVPDGAGGTLATVTEYMVNGSLRHVLVKNNRLLDCRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPIPDRCDPEWRKLMEECWSRDPECRPSFTEITNRLRSMSMALQGKGNYHAWQLRPSNNAF 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01162 1258 PRINTS Tyrosine kinase catalytic domain signature 1052 1065 IPR001245 GO:0004672|GO:0006468
Car08g01162 1258 PRINTS Tyrosine kinase catalytic domain signature 1089 1107 IPR001245 GO:0004672|GO:0006468
Car08g01162 1258 PRINTS Tyrosine kinase catalytic domain signature 1160 1182 IPR001245 GO:0004672|GO:0006468
Car08g01162 1258 PRINTS Tyrosine kinase catalytic domain signature 1204 1226 IPR001245 GO:0004672|GO:0006468
Car08g01162 1258 PANTHER SERINE-THREONINE PROTEIN KINASE 87 1248 - -
Car08g01162 1258 MobiDBLite consensus disorder prediction 514 529 - -
Car08g01162 1258 Gene3D - 188 270 - -
Car08g01162 1258 SMART serkin_6 970 1239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01162 1258 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1095 1107 IPR008271 GO:0004672|GO:0006468
Car08g01162 1258 SUPERFAMILY Protein kinase-like (PK-like) 966 1232 IPR011009 -
Car08g01162 1258 ProSiteProfiles Protein kinase domain profile. 970 1250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01162 1258 MobiDBLite consensus disorder prediction 901 939 - -
Car08g01162 1258 SUPERFAMILY CAD & PB1 domains 186 278 - -
Car08g01162 1258 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 87 1248 - -
Car08g01162 1258 Gene3D Phosphorylase Kinase; domain 1 963 1057 - -
Car08g01162 1258 Gene3D Transferase(Phosphotransferase) domain 1 1058 1253 - -
Car08g01162 1258 ProSitePatterns Protein kinases ATP-binding region signature. 976 1001 IPR017441 GO:0005524
Car08g01162 1258 MobiDBLite consensus disorder prediction 497 529 - -
Car08g01162 1258 CDD PB1_UP2 173 268 - -
Car08g01162 1258 CDD STKc_MAP3K-like 976 1233 - -
Car08g01162 1258 SMART PB1_new 184 271 IPR000270 GO:0005515
Car08g01162 1258 MobiDBLite consensus disorder prediction 911 927 - -
Car08g01162 1258 Pfam Protein tyrosine and serine/threonine kinase 973 1233 IPR001245 GO:0004672|GO:0006468
Car08g01162 1258 Pfam PB1 domain 186 270 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01162 Car-Chr8 12615220 12624677 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01162 166 303 MAP Kinase Kinase Kinase AT1G16270 63.043 1.76e-43 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Car08g01162 PK_Tyr_Ser-Thr 2.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01162 - - aprc:113862751 1545.02