Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01160 ATGGGTTGCAACACATTGATGAGTTCTATTGCAATCTCAGCTTTTCCATCACTTCTTTCTTCATCAAAATCAAGATTTGCAACTTCTCTTCCAATTCCAAATGTTGCATCTTCTTCAAGATTCAATATGACTGCTGATAATTGGATGCCTGGTCAGCCTAGACCTCCTTATCTTGATGGCTCAGCTCCTGGAATTTTTGTGTGGTTATGTTTCAGTGACTTTGGATTTGACCCTCTTCGTCTTGGTGAAGTGCCAGAGAATCTTGAGAGATTCAAAGAGTCAGAACTGATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGATACCAGAGGCATTAGGGTTAGGAAATTGGGTAAAAGCTCAGGAATGGGCAGCAGTCCCTGGAGGACAAGCAACATACCTAGGGAACCCTGTTCCATGGGGCACCCTACCCACCATTTTGGTCATTGAATTCCTTGCTATTGCATTTGTTGAACACCAAAGGAGTATGGAGAAAGACCCTGAAAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCTAAAGACCCTAAAAAGTTCCATCAATACAAAATTAAAGAAGTTAAGAATGGACGTCTTGCATTGTTGGCTTTTGTTGGAATATGTGTTCAACAATCAGCTTATCCAGGGACTGGACCTTTGGAGAATTTGGCTACTCACTTGGCTGATCCATGGCACAACAACATTGGAAATATCCTTATTCCACCACAATAA 750 0.4213 MGCNTLMSSIAISAFPSLLSSSKSRFATSLPIPNVASSSRFNMTADNWMPGQPRPPYLDGSAPGIFVWLCFSDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILIPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKFHQYKIKEVKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGNILIPPQ 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01160 249 Gene3D Chlorophyll a/b binding protein domain 49 243 - -
Car08g01160 249 SUPERFAMILY Chlorophyll a-b binding protein 43 245 - -
Car08g01160 249 Pfam Chlorophyll A-B binding protein 55 217 IPR022796 -
Car08g01160 249 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 19 242 IPR001344 GO:0009765|GO:0016020
Car08g01160 249 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 19 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01160 Car-Chr8 12569685 12571401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01160 1 204 Chloroplast and Mitochondria Gene Families AT3G54890 75.122 1.32e-103 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01160 K08907 - rcu:8270733 435.261