Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01134 ATGCCGGCAACATGTGCCGCCAGAATATTCCAGCTAACACGGGAGCTTGGTCACAAATCCGACGGAGAAACAATACGGTGGTTGCTAGAGCAAGCCGAACCTTCAATGATAGAAGCAACCGGCACCGGAACAGTTCCGGCCATTTCCGTTTCAGTCGGCGGCACGTTAAAGATTCCAACTTCATCACCGGCAAGACCAGACGGGTTAGCACCAAGTGCACAAACTGCATACAGCGGTGCTGCCGGTGGAAGTGGTGGTGGAATAGTCCCTTTATGGCCTGTGCTAATACATGAAGTTCAAGAAGCCCGAATTGGTCTTGTGCTGCATGTAGGGGCAAACGTATGGAAAAAATCAACGATAGGGGCAGATACAAATGCAATGTTAACACCTTTTTTCCGTCCTTGCAAAATAGAGTTGGAATCGGAATGTGCATTTGTGACAATAGTGGTAATTTTGTTCTAG 462 0.4805 MPATCAARIFQLTRELGHKSDGETIRWLLEQAEPSMIEATGTGTVPAISVSVGGTLKIPTSSPARPDGLAPSAQTAYSGAAGGSGGGIVPLWPVLIHEVQEARIGLVLHVGANVWKKSTIGADTNAMLTPFFRPCKIELESECAFVTIVVILF 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01134 153 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 65 IPR005333 GO:0003700
Car08g01134 153 Pfam TCP family transcription factor 1 50 IPR017887 -
Car08g01134 153 ProSiteProfiles TCP domain profile. 1 39 IPR017887 -
Car08g01134 153 PANTHER TRANSCRIPTION FACTOR TCP9-LIKE 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01134 Car-Chr8 11897079 11898232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01134 1 63 TCP Transcription Factor Family AT5G51910 88.889 1.41e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car08g01134 TCP 3.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01134 - - cam:101514016 155.606