Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01131 ATGCTAGGGGGATTAAGCAGCTCAGGAGATGCAGCAATATCAGCTGCCGGAGCTCAACATGACGGTGGTGATACGGCGGGAGGTGGTGGTTATGGTGGTGGAGGATCAAATTCAGGAGATGATGAAAGAGGGGGTGGAAATAGAAGTGAAGAGGGTGTAGATAGAAGTTTTGGTGGAAATAGATGGCCAAGAAATGAAACTCTTGCTTTGTTGAAGATAAGGTCAGAAATGGATGTTGCTTTTAGAGATGCAAGTGTTAAAGGTCCCTTATGGGAAGAAGTTTCAAGGAGAATGGCAGAATTTGGGTATCAAAGAAACTCAAAAAAATGCAAAGAAAAATTTGAAAATGTTTACAAGTATCACAAAAGAACCAAAGAAGGAAGAGGTGGAAAATCAGATGGTAAAACTTATAGATTTTTTGATCAATTACAAGCCCTTGAAAATAACCCTTCAATTCAAATTCAaccatcaccaacaccttcaaaattaccaccgccaCAATTGAATAACAGTACTTCATCACTACCCTCACAATCATTACCAATTTCAACCACATCAACAACAACAATGCCATTGCTATTCCCACCCCCCTTGTTAAACACTACACCCCCTTCTACTATTCCATCAACAATTACAACTACACTTCCAATTTCTTCACCTCAAATTCAAGGCATTGTCAACACTCCATCAATTAACCTCACAAACCCTACATATTTTCCAACAACAACAACAACGAATCCTGATCTTCCCCAAACCATCACACCACCTTCTTTGTTCCCGAACATCTCCACCGATTTGTTCTCGAACTCAAGTTCTTCTTCAACATCTTCAGAGGAAACAACGACAACGGCCGAAGGGGGAAATCGGCGAAAGCGAAAGAGAAAATGGAAGGATTTCTTTGAGAGACTAAAGAAAGAGGTTGTTGAGAAACAAGAGGAACTTCATAAGAGATTCTTAGAAGCTATTGAAAAAAGAGATAACGAGAGAGTTAAAAGAGAAATAACTTGGAGATTGCAAGAGATGCAAAGGATCAAAAGAGAAAGAGAAGTTCTTGCACAAGAAAGATCCATTGCTGCTGCTAAAGATTCAGCTGTCATGGCCTTTTTGCAAAAGTTTGCTGAACAACAAAATCAAGAACAACAGCATCAACAACAAAATCTTGTTCCTCCATTGAACAACAATACCAACATTCCACAACAAGAGCCACAAGCAACTACACCAATGTCAATGTCAATGCCAACACCCCAACAAATTCAAGTTCAAATTCCAACTTCATCAATGAAACAAACAACACCTGTTATTCCTCAAGCTCCGCCATTGACAACGACACTGACACTGACATATCAACAGCAGCAGCCGGAGCCGGCAAACAATATGGAAATGATAATTAAAAATGACAACAATGGTGAGAGTAATTTAATGCAACCAAGTTCATCAAGGTGGCCAAAAACTGAGGTTGAAGCATTGATAAAGATGAGAACAAGTCTTGATACAAAGTATCAAGAAAATGGACCTAAAGGGCCATTATGGGAAGAGATTTCAGGGCTGATGAAGAAATTGGGGTACAATAGGAATGCAAAGAGGTGTAAAGAGAAGTGGGAGAACATCAACAAGTATTTCAAGAAAGTGAAGGAGAGCAACAAGAAAAGGCCTGAAGATTCAAAGACTTGTCCTTATTTTCATCAACTTGATGCTCTATATAGAGAGAAGAACAAGGGAGATAGTCCGGGTGTGGTTTCGAGGCCCGAGGGATCGATGATGATACCGTTGATGGTGCGGCCCGAACAACAATGGCCTCCACAACAACAACATCCGCCTCTAGTAACTGGGACGGATGTCGTCATGGAGGATGCTGAGAATGACCGGCCGCACCGGAatgaagaagagtattatgatgacgacgacgaggatgatgaagggagtgataattatgTAGTGGTGGCCAACAAACCACCACCAGCTCAATAA 1968 0.3908 MLGGLSSSGDAAISAAGAQHDGGDTAGGGGYGGGGSNSGDDERGGGNRSEEGVDRSFGGNRWPRNETLALLKIRSEMDVAFRDASVKGPLWEEVSRRMAEFGYQRNSKKCKEKFENVYKYHKRTKEGRGGKSDGKTYRFFDQLQALENNPSIQIQPSPTPSKLPPPQLNNSTSSLPSQSLPISTTSTTTMPLLFPPPLLNTTPPSTIPSTITTTLPISSPQIQGIVNTPSINLTNPTYFPTTTTTNPDLPQTITPPSLFPNISTDLFSNSSSSSTSSEETTTTAEGGNRRKRKRKWKDFFERLKKEVVEKQEELHKRFLEAIEKRDNERVKREITWRLQEMQRIKREREVLAQERSIAAAKDSAVMAFLQKFAEQQNQEQQHQQQNLVPPLNNNTNIPQQEPQATTPMSMSMPTPQQIQVQIPTSSMKQTTPVIPQAPPLTTTLTLTYQQQQPEPANNMEMIIKNDNNGESNLMQPSSSRWPKTEVEALIKMRTSLDTKYQENGPKGPLWEEISGLMKKLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYREKNKGDSPGVVSRPEGSMMIPLMVRPEQQWPPQQQHPPLVTGTDVVMEDAENDRPHRNEEEYYDDDDEDDEGSDNYVVVANKPPPAQ 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01131 655 CDD GT1 60 125 - -
Car08g01131 655 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 14 645 - -
Car08g01131 655 ProSiteProfiles Myb-like domain profile. 479 537 IPR001005 -
Car08g01131 655 Pfam Myb/SANT-like DNA-binding domain 479 566 IPR044822 -
Car08g01131 655 Pfam Myb/SANT-like DNA-binding domain 60 146 IPR044822 -
Car08g01131 655 MobiDBLite consensus disorder prediction 256 293 - -
Car08g01131 655 MobiDBLite consensus disorder prediction 151 189 - -
Car08g01131 655 PANTHER - 14 645 - -
Car08g01131 655 MobiDBLite consensus disorder prediction 166 189 - -
Car08g01131 655 MobiDBLite consensus disorder prediction 256 283 - -
Car08g01131 655 CDD GT1 479 544 - -
Car08g01131 655 MobiDBLite consensus disorder prediction 597 655 - -
Car08g01131 655 MobiDBLite consensus disorder prediction 43 57 - -
Car08g01131 655 MobiDBLite consensus disorder prediction 15 62 - -
Car08g01131 655 ProSiteProfiles Myb-like domain profile. 60 118 IPR001005 -
Car08g01131 655 Gene3D - 481 542 - -
Car08g01131 655 Gene3D - 62 123 - -
Car08g01131 655 SMART sant 58 120 IPR001005 -
Car08g01131 655 SMART sant 477 539 IPR001005 -
Car08g01131 655 MobiDBLite consensus disorder prediction 615 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01131 Car-Chr8 11827531 11831097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01131 58 597 Trihelix Transcription Factor Family AT1G76890 47.016 3.04e-141 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car08g01131 Myb_DNA-bind_4 3.9e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01131 - - gmx:100804788 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01131 08 11827531 11831097 Car04g01122 04 11390710 11393676 PCT