Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01130 ATGGAAGGGAATTTATCACAAGGAGGTATAATTCAAGGTGGTAGTAGTTCTTTTGGTGGTTTTGATTTTCCGGGATCGATGCGTGTTCAACGTCAATCGCAGCAGCATCCGAATACAATGAACCAACACCAAAATCATCCTGGTCAAGGGTCTTCGGTGCCTAGTTCGATTCACGACGGTTTTCCTCTTACAATGGGGACTTTACCAAACTGTGATCAGACGATGTCGATGAATGAGTTTAGTCAGGGAGATAATAGGAACAAAAACTCGGCTAGCGAGGAGGATGAGCCTGAGGAAGGTGGTGATGGTCATCAAGAAGGAGGGAGAGGGAAAAAGGGGTTGCCTTGGACGCGTGTGAAGTGGACTGATAAGATGGTGAGGCTTCTGATAACGGCCGTGTCTTATATCGGTGAGGATGTGACTTCTGAAGGTGGTGGTGGAGGGAGGAGAAAATTTGCAGTCTTGCAGAAAAAGGGTAAGTGGAAATCGGTTTCTAAGGTTATGGCTGAAAGAGGTTACCGTGTTTCACCTCAGCAGTGTGAGGATAAGTTCAATGATCTTAATAAAAGGTATAAAAGGCTTAATGATATGCTCGGACGTGGAACTTCTTGTCAAGTTGTCGAAAATCCGGCTTTGTTGGATGTAATCAATTATCTTTCTGAGAAAGAAAAGGACGATGTTAGAAAAATATTGAACTCAAAACATCTTTTCTATGAAGAGATGTGTTCTTACCATAATTGTAATAGATTGCATTTACCGCACGATCCTGCATTGCAAAGGTCTCTGCAGATAGCTCTTCGAAATAGAgatgatcatgatactgacgaagtgagaaggtcctaccatgatgatcacgaagaggatgatcatgatatgGAAACTGACGATCACGACGACTTTGAAGAGACTTATGCTTCCCATGGAGATAATCGAGGAATCTACTGTGGTTTGGGAGGATCAACCAAAAGAGTAAGACAAGGCCAAGAAGATGCTAATACTTTCGGGAATTGTTTCAATAGTCACGAGCACAATAAAAGTTCGTATCCGCACGGACAAATGGTCCAACCCGATGGAAATCAAGCTTTACCTGAAAGCATGAGAGCAGCTTGGTTACAACAGAAGCAATGGATCGAAACTCGCTCCGTTCAGTTAGAAGAACAGAAGCTACAAATTCAAATGGAGATGATGGAACTAGAGAAACAAAGATTCAAGTGGCAGAAATTTAGCCAGAAAAAAGACCGTGAGTTGGAGAAGTTGAAGCTGGAGAATGAAAGAATGAAGCTCGAGAATGAACGTATGGCTTTAGAACTAAAGCGAAAGGATATCGGAACCAGCTTTAACTAG 1344 0.4033 MEGNLSQGGIIQGGSSSFGGFDFPGSMRVQRQSQQHPNTMNQHQNHPGQGSSVPSSIHDGFPLTMGTLPNCDQTMSMNEFSQGDNRNKNSASEEDEPEEGGDGHQEGGRGKKGLPWTRVKWTDKMVRLLITAVSYIGEDVTSEGGGGGRRKFAVLQKKGKWKSVSKVMAERGYRVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPALLDVINYLSEKEKDDVRKILNSKHLFYEEMCSYHNCNRLHLPHDPALQRSLQIALRNRDDHDTDEVRRSYHDDHEEDDHDMETDDHDDFEETYASHGDNRGIYCGLGGSTKRVRQGQEDANTFGNCFNSHEHNKSSYPHGQMVQPDGNQALPESMRAAWLQQKQWIETRSVQLEEQKLQIQMEMMELEKQRFKWQKFSQKKDRELEKLKLENERMKLENERMALELKRKDIGTSFN 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01130 447 MobiDBLite consensus disorder prediction 1 115 - -
Car08g01130 447 Coils Coil 381 401 - -
Car08g01130 447 Coils Coil 409 438 - -
Car08g01130 447 MobiDBLite consensus disorder prediction 67 87 - -
Car08g01130 447 Pfam Myb/SANT-like DNA-binding domain 118 244 IPR044822 -
Car08g01130 447 PANTHER FACTOR, PUTATIVE-RELATED 1 447 - -
Car08g01130 447 Gene3D - 121 193 - -
Car08g01130 447 MobiDBLite consensus disorder prediction 27 58 - -
Car08g01130 447 MobiDBLite consensus disorder prediction 269 287 - -
Car08g01130 447 MobiDBLite consensus disorder prediction 269 305 - -
Car08g01130 447 PANTHER F16F4.11 PROTEIN-RELATED 1 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01130 Car-Chr8 11752575 11754705 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car08g01130 Myb_DNA-bind_4 1e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01130 - - mtr:MTR_6g035315 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01130 08 11752575 11754705 Car04g01124 04 11438565 11439914 PCT