Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01125 ATGGAATCTTTGAACCAACAAGGCAAATTTGTTGTTCCAATGATTCCAAATGAACAAGACCTTGAGCAACAAGCAACAACAACATTAGAAGTTGAAACAAAGGATTTTGATTACTCAAAAAGATCACAATGGTTAAGAGCAGCTGTTTTAGGAGCCAATGATGGTTTGGTTTCAACAGCTTCACTAATGATGGGAGTTGGAGCTGTTAAACATGACATCAAAGCTATGATCTTGACAGGTTTTGCTGGATTGGTTGCAGGGGCTTGTAGTATGGCAATTGGTGAGTTTGTGTCTGTTTATTCGCAATTGGATATCGAAGTTGCTCAGATGAAAAGGGAGAAGGAACGTTGCAGAGGAATTATTGAACATGTTATTGTTGACAAGAATGAGAATTTGCCTAATCCATTACAAGCTGCTGCAGCATCAGCTTTAGCTTTTTCTGTTGGTGCAATGGTGCCATTACTTGCTGCATTTTTTATAAGTGATTATAAGGTTAGGATTGGAgttgttgttgttgctgttagttttgctttgcttgtttttggttggttaggtgctgttttgGGTAAAGCTCCAATTTTTAGGTCTTCTTTAAGGGTTTTGGTTGGTGGTTGGGTGGCTATGTCCATTACTTTTGGGTTAACTAAGTTGATTGGTTCAAGTGGACTTTAG 672 0.3512 MESLNQQGKFVVPMIPNEQDLEQQATTTLEVETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKHDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERCRGIIEHVIVDKNENLPNPLQAAAASALAFSVGAMVPLLAAFFISDYKVRIGVVVVAVSFALLVFGWLGAVLGKAPIFRSSLRVLVGGWVAMSITFGLTKLIGSSGL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01125 223 CDD Nodulin-21 43 192 - -
Car08g01125 223 Pfam VIT family 45 117 IPR008217 GO:0005384|GO:0030026
Car08g01125 223 Pfam VIT family 127 215 IPR008217 GO:0005384|GO:0030026
Car08g01125 223 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 25 220 IPR008217 GO:0005384|GO:0030026
Car08g01125 223 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 25 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01125 Car-Chr8 11670427 11671796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01125 20 223 Nodulin-like Gene Family AT3G43660 68.627 1.81e-96 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01125 K22736 - zju:107406772 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01125 08 11670427 11671796 Car04g01130 04 11497072 11497805 PCT