Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01124 ATGGACCCTAATAAGTTCATCGGAAAGCCACCAACGATAATTGACCTAGAACGTATGCCGGAGCGTGGGTCCCACCACCGGAGATCTCACTCCGACACTTCCTTCCGTTTCGCCGCCACCTTCGACGACATTCTCCTCTTCGACCcttccgacttcgacatctccaatctccctcttccgtctcccgtctccgGCGCCGTTCCGATGAGCGTCGATTCCGATGAGTCCAACGGGAAGTCAACGTCGGCGCGTCAGTCTGTCGGACACCTCCGGAGTTTGTCTGTTGACTCTGACTTTTTTGATGGATTAGGGTTCTCCGGCGCCGGTGAGGAGAAAATTGGGGAGAGGAAGGTGAACCGTCATAGGCATAGTAATTCGATGGATGGGTCTTCGACGACGTCGTTTGATGGTGACTCGGGTATGGTGATCATTGACGGTGTGAAGAAATCCATGCCACCTGAGAAACTTGCTGAACTTGCTCTTATTGATCCTAAGAGAGCTAAAAGGATTCTTGCTAATAGGCAATCTGCTGCTCGATCGAAGGAGAGGAAAACTCGGTATACAAGTGAACTGGAGAGGAAGGTGCAGACACTTCAAACTGAAGCAACTAACCTATCTGCGCAACTTACCATCCTTCAGAGAGACACTACTGATTTGTCTGCTCAGAATAAGGAGCTCAAAATGAAGTTAGAGGCTTTTGAACAACAAGCACAACTTAGAGAAGATCTCAACGAGGCATTGAAAAAAGAACTGCAACGCCTTCGGGCGCAAAAGAGTCAATTGACTGCTGTCACTAGTAATCCTTCTTATGGCGGCATCTTCTCACAATTCGCTACCCAATTAACCATGCAACAGACAAGTAATCCTCATCCCCAACAAGCACAACCCGGCATGCCGCCTTCTCGTTCCGATCAACCTTTCAATTTGCACGGCCGCCCTAACTTCATGGACTTCAATCACCAGAAGTAG 969 0.4644 MDPNKFIGKPPTIIDLERMPERGSHHRRSHSDTSFRFAATFDDILLFDPSDFDISNLPLPSPVSGAVPMSVDSDESNGKSTSARQSVGHLRSLSVDSDFFDGLGFSGAGEEKIGERKVNRHRHSNSMDGSSTTSFDGDSGMVIIDGVKKSMPPEKLAELALIDPKRAKRILANRQSAARSKERKTRYTSELERKVQTLQTEATNLSAQLTILQRDTTDLSAQNKELKMKLEAFEQQAQLREDLNEALKKELQRLRAQKSQLTAVTSNPSYGGIFSQFATQLTMQQTSNPHPQQAQPGMPPSRSDQPFNLHGRPNFMDFNHQK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01124 322 MobiDBLite consensus disorder prediction 70 85 - -
Car08g01124 322 MobiDBLite consensus disorder prediction 284 302 - -
Car08g01124 322 MobiDBLite consensus disorder prediction 15 31 - -
Car08g01124 322 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 14 320 - -
Car08g01124 322 Pfam bZIP transcription factor 165 223 IPR004827 GO:0003700|GO:0006355
Car08g01124 322 Gene3D - 164 217 - -
Car08g01124 322 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 14 320 - -
Car08g01124 322 SMART brlzneu 161 225 IPR004827 GO:0003700|GO:0006355
Car08g01124 322 MobiDBLite consensus disorder prediction 1 31 - -
Car08g01124 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 163 226 IPR004827 GO:0003700|GO:0006355
Car08g01124 322 MobiDBLite consensus disorder prediction 114 135 - -
Car08g01124 322 MobiDBLite consensus disorder prediction 284 322 - -
Car08g01124 322 Coils Coil 188 264 - -
Car08g01124 322 CDD bZIP_plant_RF2 166 215 IPR044759 GO:0003700|GO:0006355
Car08g01124 322 SUPERFAMILY Leucine zipper domain 165 217 IPR046347 GO:0003700|GO:0006355
Car08g01124 322 MobiDBLite consensus disorder prediction 66 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01124 Car-Chr8 11655679 11660071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01124 8 318 bZIP Transcription Factor Family AT1G43700 47.429 5.26e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car08g01124 bZIP_1 4.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01124 K20557 - gmx:778142 439.113