Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01107 ATGATAGCGGTAGCATCTATTGCTGCCGGTATACAATTCGGGTGGGCCCTACAGCTCTCACTTCTGACACCATACATCCAATTACTCGGAGTACCCCACAAATGGGCTGCCAATATTTGGCTATGCGGTCCCATTTCCGGTATGATCGTCCAGCCGTTAGTCGGTTATTACAGCGACCGAAGTCATTCTCGATTCGGTCGCCGTCGTCCCTTCATCTTTTTCGGTGCCATTGCCGTCGCCATTGCCGTTTTCCTTATCGGATACGCAGCCGACATCGGCCACACCTTAGGCGACGACCTCACGAAAAAAACACGGACACGTGCCGTAGTTATATTCGTATTAGGTTTTTGGATACTCGACGTAGCCAATAACATGCTCCAAGGACCTTGTCGCGCATTTCTTGGTGACTTAGCAGCAGACGACCATAGTCGAATGAGAACAGGAAACGCCCTGTTCTCATTTTTTATGGCCGTCGGAAACGTGTTGGGTTATGCCGCTGGATCTTACAGCAACCTCCACAAACTGTTCCCTTTTACGGAAACAAAAGCATGTGACGTGTTTTGTGCAAATCTAAAAACGTGTTTCTTTTTTTCAATATTTCTACTCGCATTAGTCTCTGCATTTGCTCTCATATACGTAGAAGACATTCCAATTACATCGCAAGAAGAAATACAAGTTTCGTGTTTCGGAGAATTGTTAGGAGCAGTTAATGGAATTAAAAAACCAATGTGGATGCTAATGTTGGTGACAGCAATAAATTGGGTAGCGTGGTTCCCATTCTTTTTATTCGACACAGATTGGATGGGTCGTGAAGTGTACGGAGGAGAAACTGGAGAAAAATCGTACAACGATGGAGTTCGTGCAGGAGCATTAGGATTGATGCTGAATGCTTTTGTGCTTGCAATAGTGTCATTGGTGGTTGAACCAATGGGGCGTTTGGTTGGGGGTGCAAAGAGACTTTGGGGAATAGTCAATTTTATTCTTGCTATTGGACTCGCAATGACGATACTCATTACAAAGGCAGCTGAGCATGATCGCCGTCTAACCGGTCACACGGCGCCGTCTACCGGTGTTAAGGCTGCCGCATTCTCTTTCTTTGGTGTGCTTGGAATCCCTCTTGCGGTTAATTTCAGTGTTCCGTTTGCTTTAGCATCAATTTATTCCAGCTCATCAGGGGCAGGACAAGGTTTATCTTTGGGAGTCCTCAATATTTCAATTGTCGTTCCACAGATGATAATATCATCATTGAGTGGACCATGGGATGCTTTGTTTGGTGGTGGCAACTTGCCGGCGTTTGTGGTCGGTGCGGTGGCGGCAGTCATCAGTGGTATATTGGCAATTATCGTTCTGCCTACTCCAAAGCCTGAGGATGAGGCCAAAGCTACAATTGCTGGTGGTTTTCATTAA 1407 0.4613 MIAVASIAAGIQFGWALQLSLLTPYIQLLGVPHKWAANIWLCGPISGMIVQPLVGYYSDRSHSRFGRRRPFIFFGAIAVAIAVFLIGYAADIGHTLGDDLTKKTRTRAVVIFVLGFWILDVANNMLQGPCRAFLGDLAADDHSRMRTGNALFSFFMAVGNVLGYAAGSYSNLHKLFPFTETKACDVFCANLKTCFFFSIFLLALVSAFALIYVEDIPITSQEEIQVSCFGELLGAVNGIKKPMWMLMLVTAINWVAWFPFFLFDTDWMGREVYGGETGEKSYNDGVRAGALGLMLNAFVLAIVSLVVEPMGRLVGGAKRLWGIVNFILAIGLAMTILITKAAEHDRRLTGHTAPSTGVKAAAFSFFGVLGIPLAVNFSVPFALASIYSSSSGAGQGLSLGVLNISIVVPQMIISSLSGPWDALFGGGNLPAFVVGAVAAVISGILAIIVLPTPKPEDEAKATIAGGFH 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01107 468 PANTHER SUGAR TRANSPORTER 1 458 - -
Car08g01107 468 CDD MFS_SLC45_SUC 1 447 - -
Car08g01107 468 SUPERFAMILY MFS general substrate transporter 3 456 IPR036259 -
Car08g01107 468 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 1 458 - -
Car08g01107 468 Gene3D MFS general substrate transporter like domains 1 223 IPR036259 -
Car08g01107 468 TIGRFAM GPH_sucrose: sucrose/H+ symporter 2 455 IPR005989 GO:0005887|GO:0008515|GO:0015770
Car08g01107 468 Pfam MFS/sugar transport protein 4 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01107 Car-Chr8 11237259 11241333 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01107 1 468 Sucrose Transporter Gene Family AT1G71890 67.292 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01107 K15378 - gmx:100784153 673.315