Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01102 atgaaattcaaattcaaatttcaaatGAACATGTACTTCAAATCTCACTTTCTATTCCTAACCCTTGTTTTCGTCACCACCACCGTCGCCGCCGTATCCCCCGGCACCACCCTCTCCGCCTCCAATACCAACCAATCATGGTCCTCTCCGAGTTCCACTTTCTCCCTCCACTTCATCCCCGTCGATCCACCAACCTCCCCTCCTTCCTTCCTCGCCGCCATCGTCTACTCCGGCGGTGCTCCCGTCGTATGGACAGCCGGTAACTCCACCGCCGTCGATTCCAATGGTTCCTTCCAATTCCTCACCACCGGTTCCCTTCGTCTCGTCAACGGCTCCGGCGCCACTGTCTGGGACTCAGGTACCGCTAACCTCGGTGCGACATCAGCCACCGTCGATGACACTGGTAAATTGGTAATTTCAAACGGAACAAAAATCCTTTGGTCAAGCTTTGACCACCTTACTGATACACTTTTGCCTTCACAGAATTTCAGTGTTGGTAAGGTTCTGAAATCTGGTCTTTATAGTTTTAGTCTTAGTGAAATTGGTAATTTATCATTGATATGGAATGATAGCATAATTTTCTGGACTAAAGGTGTAAATTCATCTGTGAATGGTAGTTTGAGTTCACCTTTTATATCGTTGTCATCGATCGGGATATTGCAACTTTCGGATCTGAATTTGAGTACTCCTGCTGTTGTTGCTTATAGTAGTGATTATGCTGATGCCGGTAGCGGTGGTAGTGATGTTTTAAGGATTTTGAAATTAGATAATGATGGGAATTTAAGGATTTATAGCACTTCTAAGGGTAGTGGAAACCCTAGAGTTAGATGGGCTGCTGTTGAAGATCAATGTGAAGTTTATGCTTATTGTGGGAATTATGGTATATGTAGTTATAATGATACTAACACTATTTGTGGGTGCCCTTCTGAGAATTTTGAGTTCTTGAGTAGTAGTAATAGTAGGAAGGGGTGTAGGAGGAAGGTTAGTCTTGATAGTTGTCAAGGGAATGAAACTATGTTGACATTGGATCATACTCAGTTATTGACTTATAAACCTGATACTGAGTCGCAGGCCTTTTTCATTGGTATATCGGCGTGTAGAGGGAATTGTTTGTCAGGTTCGCGTGCATGTTTTGCTTCTACTTCTTTGTCGGATGGGACGGGTCAATGTTATATGAAATCGGTTGATTTTGTTAGTGGTTATCATAGTCCTGCGTTACCTAGTACTTCTTATATTAAGGTTTGTTCACCGTTGGCTCCGAATCCGCCGCCTTCTTTAGGCGAGACGGTGAAGGAAAAGAGTTCGAGTGTACCTGCTTGGGTTGTTGTGGTTGTTGTTTTGGGTACCCTTTTAGGTGTGGTTGCAATTGAAGGTGGTTTATGGATATGGTGCTGTAGAAAAAATGCGAGGTTTGGTGTTTTGTCGGCTCAGTATGCTCTTCTTGAGTATGCTTCGGGTGCGCCAGTTCAGTTCTCGTACAAGGAGCTTCAGCGGTCGACGAAAGGGTTCAAGGAGAAGCTTGGAGCTGGTGGATTTGGTGCTGTTTATCGAGGAATTCTTGTTAACAAAACTATTGTTGCAGTGAAACAACTTGAAGGCATTGAGCAAGGTGAGAAACAGTTTAGGATGGAAGTTGCAACTATAAGTAGTACACATCATCTTAATTTGGTGAGGCTTATCGGTTTTTGCTCCGAAGGGCGACACAGGCTTTTGGTCTACGAGTTCATGAAAAACAGTTCATTGGATAATTTTCTATTCCCAAAAGAAGAGCAATCAGGAAAGTTGTTGAATTGGGAGTATCGGTACAATATCGCACTAGGAACTGCAAGAGGAATCACGTACCTTCACGAGGAGTGTCGCGATTGCATAGTCCACTGTGATATCAAACCTGAAAACATTCTCTTGGATGAGAATTATGTCGCTAAAGTCTCCGATTTTGGTCTTGCAAAGCTTGTTAACCCAAAGGACCATAGGAATAGAACCTTGACAAGCGTACGAGGAACAAGAGGATATTTAGCCCCCGAGTGGATTGCAAATCTTCCAATAACATCGAAATCCGATGTTTACAGCTATGGCATGGTTCTGTTAGAGATTGTGAGTGGAAAGAGGAACTTCGATGTCTCAGAGGAAACAAATAGGAAGAAGTTCTCCATTTGGGCCTATGAAGAGTTTGAGAAAGGCAACATCAAAGGAATTTTGGATAAAAGACTTGCAGAGCTAGAAGTCGATATGGCGCAAGTTACACGAGCGATTCAAGTATGCTTTTGGTGCATCCAAGAGCAACCATCTCAAAGACCAGCAATGAGTAAAGTTGTTCAAATGCTAGAAGGGGTAAAAGAAATTGAGAAGCCACCACCCCCTAAATTTGTTGTTGAAGGACCTGTTAGTGGAACCAGCACCTATATCAGCAGCAATATTAGTGCATTGTCCACCACAATAGGAGCCTCACCtcatgatccttcatcatcatcatcatTCCAGACAAGTCGTGTTTCAAGCCTCACCATTGGAAGAAACCCTGAGAAGGCAACTTCGTCCCTTTTACAATTGGATCAATCATAG 2562 0.4282 MKFKFKFQMNMYFKSHFLFLTLVFVTTTVAAVSPGTTLSASNTNQSWSSPSSTFSLHFIPVDPPTSPPSFLAAIVYSGGAPVVWTAGNSTAVDSNGSFQFLTTGSLRLVNGSGATVWDSGTANLGATSATVDDTGKLVISNGTKILWSSFDHLTDTLLPSQNFSVGKVLKSGLYSFSLSEIGNLSLIWNDSIIFWTKGVNSSVNGSLSSPFISLSSIGILQLSDLNLSTPAVVAYSSDYADAGSGGSDVLRILKLDNDGNLRIYSTSKGSGNPRVRWAAVEDQCEVYAYCGNYGICSYNDTNTICGCPSENFEFLSSSNSRKGCRRKVSLDSCQGNETMLTLDHTQLLTYKPDTESQAFFIGISACRGNCLSGSRACFASTSLSDGTGQCYMKSVDFVSGYHSPALPSTSYIKVCSPLAPNPPPSLGETVKEKSSSVPAWVVVVVVLGTLLGVVAIEGGLWIWCCRKNARFGVLSAQYALLEYASGAPVQFSYKELQRSTKGFKEKLGAGGFGAVYRGILVNKTIVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNSSLDNFLFPKEEQSGKLLNWEYRYNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYVAKVSDFGLAKLVNPKDHRNRTLTSVRGTRGYLAPEWIANLPITSKSDVYSYGMVLLEIVSGKRNFDVSEETNRKKFSIWAYEEFEKGNIKGILDKRLAELEVDMAQVTRAIQVCFWCIQEQPSQRPAMSKVVQMLEGVKEIEKPPPPKFVVEGPVSGTSTYISSNISALSTTIGASPHDPSSSSSFQTSRVSSLTIGRNPEKATSSLLQLDQS 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01102 853 ProSiteProfiles Protein kinase domain profile. 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01102 853 Pfam S-locus glycoprotein domain 248 308 IPR000858 GO:0048544
Car08g01102 853 ProSiteProfiles Bulb-type lectin domain profile. 154 276 IPR001480 -
Car08g01102 853 Gene3D Phosphorylase Kinase; domain 1 472 575 - -
Car08g01102 853 SMART serkin_6 501 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01102 853 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 17 839 - -
Car08g01102 853 SUPERFAMILY Protein kinase-like (PK-like) 484 776 IPR011009 -
Car08g01102 853 Pfam Protein kinase domain 504 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01102 853 Gene3D - 154 281 IPR036426 -
Car08g01102 853 CDD STKc_IRAK 507 777 - -
Car08g01102 853 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 199 IPR036426 -
Car08g01102 853 PANTHER OS07G0415500 PROTEIN 17 839 - -
Car08g01102 853 Pfam D-mannose binding lectin 82 168 IPR001480 -
Car08g01102 853 SMART blect_4 38 153 IPR001480 -
Car08g01102 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Car08g01102 853 PIRSF SRK 3 832 IPR024171 GO:0004674
Car08g01102 853 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Car08g01102 853 Gene3D - 24 152 IPR036426 -
Car08g01102 853 Pfam PAN-like domain 333 399 IPR003609 -
Car08g01102 853 Gene3D Transferase(Phosphotransferase) domain 1 576 784 - -
Car08g01102 853 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Car08g01102 853 MobiDBLite consensus disorder prediction 812 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01102 Car-Chr8 11088348 11091330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01102 474 785 Receptor kinase-like Gene Family AT5G20050 44.308 4.65e-82 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Car08g01102 Pkinase 4.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01102 - - cam:101506838 1624.37