Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01100 ATGGAGGTTACATCTCCCACCAAGAGTAACCGTGGTGACCTGAAGGGTTCTTCCCTTGAATTAGATTGTGTTGAGCCTGTTGCTAGCCCTCTTCCTAAAATGATCATTGTAGCGTCCGTCGCTGCTGGTGTTCAGTTTGGATGGGCGCTACAGCTCTCATTGTTGACCCCTTACGTGCAGACTCTTGGTGTTCCGCACATATGGGCATCTTTTATTTGGCTCTGTGGTCCAATGTCGGGTCTTCTTGTTCAACCCGTTGTTGGTTATTATAGTGATCGAAGTACGTCACGCTTCGGCCGCCGTCGTCCATTTATCTTCTTTGGTACCCTCTCTGTCGCCGTTGCTGTCTTTCTTATTGGTTACGCCGCTGACCTCGGTCACTCTTTCGGTGACGATCTCTCGCAGAAAACTAGACCACGAGCTGTTGCTTTCTTTGTCCTCGGATTCTGGATCCTTGACGTAGCAAACAACATGCTCCAGGGACCATGCCGTGCTTTCCTCGCCGACTTAGCAGCCAGCGATGAAAAAATGACAAGAACAGGTAACGCGTTCTTCTCGTTCTTCATGGCTGTCGGAAACATTTTGGGATACGCAGCTGGTTCATACAGCAGCCTATACAAAATCTTCCCATTCACCGAAACCGCGGCATGCAACATTTTCTGCGCCAATCTTAAAAGTTGCTTCTTCTTCTCCATCCTCCTCATAACAATACTGGCCGGAATCGCTCTGACTTACGTGGAAGACAAACCTCGGATGAAATCGGAGGTGAGCGACGACGACGACCAACAAGTATCATGTTTCGGACAATTGTTCCATGCATTGAAGGAGTTGAAGAAACCAATGTGGATGTTGATGTTGGTGACATGTGTGAATTGGATCGCATGGTTCCCCTTCTTCTTGTTCGACACAGACTGGATGGGTCGTGAAGTGTACGGAGGAGATGCAGGAGAGAAGGCATATGACACTGGTGTGAGATTTGGTTCTTTAGGACTTATGCTTAATGCTGTTGTTCTTGCATTAATGTCTTTGGCTGTTGAACCTTTGGGAAAAATGGTTGGAGGAATTAAGAGACTTTGGGGTATTGTTAATATTATTCTTGCTATTGGTTTGGCAATGACTGTCCTTATTACTAGGATGGCAGAGCAGGAACGTCAGCTAAGgcgtagtgAGAAATAG 1176 0.466 MEVTSPTKSNRGDLKGSSLELDCVEPVASPLPKMIIVASVAAGVQFGWALQLSLLTPYVQTLGVPHIWASFIWLCGPMSGLLVQPVVGYYSDRSTSRFGRRRPFIFFGTLSVAVAVFLIGYAADLGHSFGDDLSQKTRPRAVAFFVLGFWILDVANNMLQGPCRAFLADLAASDEKMTRTGNAFFSFFMAVGNILGYAAGSYSSLYKIFPFTETAACNIFCANLKSCFFFSILLITILAGIALTYVEDKPRMKSEVSDDDDQQVSCFGQLFHALKELKKPMWMLMLVTCVNWIAWFPFFLFDTDWMGREVYGGDAGEKAYDTGVRFGSLGLMLNAVVLALMSLAVEPLGKMVGGIKRLWGIVNIILAIGLAMTVLITRMAEQERQLRRSEK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01100 391 CDD MFS_SLC45_SUC 34 376 - -
Car08g01100 391 PANTHER SUGAR TRANSPORTER 25 384 - -
Car08g01100 391 SUPERFAMILY MFS general substrate transporter 35 376 IPR036259 -
Car08g01100 391 Pfam MFS/sugar transport protein 41 294 - -
Car08g01100 391 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 25 384 - -
Car08g01100 391 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 387 IPR005989 GO:0005887|GO:0008515|GO:0015770
Car08g01100 391 Gene3D MFS general substrate transporter like domains 32 260 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01100 Car-Chr8 11035803 11038266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01100 17 386 Sucrose Transporter Gene Family AT1G66570 66.400 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01100 K15378 - gmx:100784153 557.37