Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01096 atgacaccagtTATGAGTGGTCTTTGTTTGGAAACAACCAGAGTTATTGTTTTGCGTGGTGTTCATGTTGTTATGGCAGTTAGGAATATGAACAATGGAATGAACATCAGAGAAACTATACTTAAGGAAATTCTTGCGGCTAAAATTGATGTTATGGAATTAGATCTTAGCTCTAGGGAATATGTCAGGAAATTTGCAGTTGATTTTAACTCCTCTGGCCCACTCAACATTCTAACTAACAATGCAGGGCTTATGGCTACTCCATTCATGCTTTCCCAAGACAATATTGAATTGCAGTTTGCAACCAATCATTTAGGCCATTTTCTGTTGACAAACCTTTTATTAGAGACTATGAAAAAAACTGTAAGAGAGTGCAACCGGGAAGGCATGATAGTTTTTGTAACTTTGGACAAGATTCTCTTATTGGAGAGGGATCCTATGGAAGAGCTGAAGCACAAAAATTTTGTCCAGTTGCTTGGATATTGCATTGATGGAAACTCCTGTATTCTTGCTTATGAATTTGCATCTAATGGGTCTCTTCATGACATTTTACATGGCAAAAAAGGGGTTAAAGGAGCACAACCTGGTCCAGTTTTGACATGGGCACAGAGAGTAAAAATTGATGTTGGGGATGTAAGAGGGCTTCAATACTTGCATGAGAAAGCTGATCTCCATGTTATTCACCGGGACATCAAGTTAAGCAGTGTGCTGATCTTTGATGATGATTTCGCTAAAATTGCAGATTTTGATTTGTCAAATCAGGCTTCAGACATGGCTGCACGTCTTCATTCCACTCGTGTCCTTCGAACCTTTGGTTACCATGGACCAGAATATGCAATGACTGGGCAATTGAATGCAAAGAGTGATTTATACAGTTTTGGTGTTGTCCTTCTGGAACTTTGGACCGGTATAATTTTATATATTTTTCAAATGATAGGTAAATTCAGGCACCTACCTGTTGTGGAAAATGGTGAAGTCATTGCCATATTCACCAGATGTCTTTATGATGCCATATCTAGGATGGAGAAGGCTTCCGAGCAGGTGAGTGCCATCGTTGCTGCAGTTAAAGGCGCGGAACGCCATGGGGGTAACAATGCATCTGCAACCGCTCTAAAAACAAAAGGACTACAGCATAACAACCGCTCAAAAAACCGAAAGGACTACGGCATAACAACCGCTCTAAAAAACCGAAGGGACTGCGGCATAATAACTGCTCTAAAACCGAAGGGACTGCGGCATAATAACCGCTCTAAAACCGAAGGGACTGCGGCATAA 1275 0.4047 MTPVMSGLCLETTRVIVLRGVHVVMAVRNMNNGMNIRETILKEILAAKIDVMELDLSSREYVRKFAVDFNSSGPLNILTNNAGLMATPFMLSQDNIELQFATNHLGHFLLTNLLLETMKKTVRECNREGMIVFVTLDKILLLERDPMEELKHKNFVQLLGYCIDGNSCILAYEFASNGSLHDILHGKKGVKGAQPGPVLTWAQRVKIDVGDVRGLQYLHEKADLHVIHRDIKLSSVLIFDDDFAKIADFDLSNQASDMAARLHSTRVLRTFGYHGPEYAMTGQLNAKSDLYSFGVVLLELWTGIILYIFQMIGKFRHLPVVENGEVIAIFTRCLYDAISRMEKASEQVSAIVAAVKGAERHGGNNASATALKTKGLQHNNRSKNRKDYGITTALKNRRDCGIITALKPKGLRHNNRSKTEGTAA 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01096 424 Pfam short chain dehydrogenase 4 135 IPR002347 -
Car08g01096 424 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 148 303 - -
Car08g01096 424 Gene3D Phosphorylase Kinase; domain 1 138 174 - -
Car08g01096 424 Gene3D - 2 137 - -
Car08g01096 424 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 135 IPR036291 -
Car08g01096 424 Pfam Protein tyrosine and serine/threonine kinase 141 303 IPR001245 GO:0004672|GO:0006468
Car08g01096 424 SUPERFAMILY Protein kinase-like (PK-like) 136 335 IPR011009 -
Car08g01096 424 ProSiteProfiles Protein kinase domain profile. 94 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01096 424 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 148 303 - -
Car08g01096 424 Gene3D Transferase(Phosphotransferase) domain 1 175 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01096 Car-Chr8 10919505 10922469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01096 120 303 Receptor kinase-like Gene Family AT5G49760 46.739 4.03e-40 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Car08g01096 PK_Tyr_Ser-Thr 6.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01096 K13436 - fve:101293629 268.855