Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01089 atgaaCAAACAACTCAACCTTATCTTTCTCTTTATCCTCTTCTCATCTAGCATCAATGTAACTATCGGCGGAGACGCGGTGGCCGGAGATAAAAACCCGTTCACTCCAAAAGCTTTTCTCAATCGCTATTGGGACAAAGAGATCCGCAACAGTTTACCAAAACCATCGTTCCTGTTTTCGAAGGCGTCACCGTTAACTACGGTGGAAGCGGCGACGTTTGCCAAACTAGCCGCCGGTAACACACTCTCCACGCGCCTGCCGGAATTCTGCTCCGCCGCGAAACTTCTCTGCTTCCCGGAAGTCTCTCCCAGCCTCGAAAAGCACGACAAAGACGCAAACTTCGCCGTTTATCAAGACAAAAACTTCACCAACTACGGGACGAGTCGACCCGGTGGTGTTGACTCGTTCAAAAACTACTCCGACGGAGAAAACATTCCGGTAAACGATTTCCGCCGCTACAGTCGCGACTCTGCCGGTCACAAAGACAGTTTCACAAACTACGCCAAAGACGGCAACGTCGTCGACCAAAGCTTTCATACTTACGGTGCCGGAGCCACCGGCGGCGCCGGCGAGTTCAATAATTACGCCGAAGAAACCAATGTTCCCAACCTCGTTTTCACTTCTTACTCCGACGACTCCAACGGAAGAAAACAGTCATTCACCTCCTACTCCGAAAACGGTAACGCCGGCGAACAATCGTTCTCTTCCTACGGCAAAAACGGTAACGGCCCCACCGAAGAGTTCACGTCGTACGGAACAAGCTCCAACGTTGTTGGATCGGGTTTTTCAAATTACGCCGAAACATCTAACGCCGCTAACGACAGTTTCAAAGCTTATGGCGTTGATATGAATAACCCAACCAATACTTTCACTAACTACGCTAACGGAGGTAACGGCGCAATTCAAACGTTTTCAACTTACCGTGAAACCGCTAACGTCGGTGCCGATTCTTTCACTAGCTATGCTAAAACCGCAAACGCCGCTAAAGTTGGTTTCAACAATTACGGAAAATCCTTTAACGAAGGAACCGACATTTTCACAAGCTACGCTAAAAGTTCAAACGGTGAAACGGAGGTTAATTTCAAAGTTTACGGCGTTAACAACACTTTTAAAGAGTATTCAAAAGAAGGTGTTTCGTTTGCAAAGTACACTAACGTTAGTTCGACGTTAAGTGCTTCGGTGGAAGAGAAAAAAAACGCGGTGAGTGGTAATTTGGTAAAAAACTGGGTTGAACCGGGTAAATTCTTTAGAGAAAAAATGTTGAAAGAAGGAACAGTTATGCCTATGCCTGACATTAGAGATAAAATGCCTGAAAGGTCGTTTTTACCCCGGAGTATTCTTGCGAAATTACCTTTTTCTACCTCTAAGATCTATGAGATGAAACGGTTATTCAAAGCTTCGGATAATGGTTCTATGGAGAAAATGATGAGAGATTCTTTAGGGGAATGTGAGAGAGTTCCGAGTCGCGGTGAAACAAAACGATGTGTGGGCTCCATTGAGGACATGATCGACTTTGCAACTTCTGTTTTAGGCAGAAACGTCGTCGTTCGAACAACCAAAAATTTAAACGGGTCAAAAGGTAATGTTATGGTGGGTCGGGTTAATGGAATCAACGGTGGAAAAATAACCCGATCCGTTTCTTGTCATCAGAGTTTGTTTCCTTATTTACTTTATTACTGTCACTCTGTTCCTATGGTTCGGGTCTATCAAGTGGATCTACTTGATCCGAAAACTAAATCTAAGATTAATCAAGGTGTTGCAGTTTGCCACTTGGATACTTCTGATTGGAGCCCGAGTCATGGAGCTTTTCTTTCTCTCGGGTCGGGTCCGGGTCGGATTGAAGTTTGTCACTGGATATTTGAGAACGACATGTCGTGGACAGTTGCTGATTGA 1893 0.4527 MNKQLNLIFLFILFSSSINVTIGGDAVAGDKNPFTPKAFLNRYWDKEIRNSLPKPSFLFSKASPLTTVEAATFAKLAAGNTLSTRLPEFCSAAKLLCFPEVSPSLEKHDKDANFAVYQDKNFTNYGTSRPGGVDSFKNYSDGENIPVNDFRRYSRDSAGHKDSFTNYAKDGNVVDQSFHTYGAGATGGAGEFNNYAEETNVPNLVFTSYSDDSNGRKQSFTSYSENGNAGEQSFSSYGKNGNGPTEEFTSYGTSSNVVGSGFSNYAETSNAANDSFKAYGVDMNNPTNTFTNYANGGNGAIQTFSTYRETANVGADSFTSYAKTANAAKVGFNNYGKSFNEGTDIFTSYAKSSNGETEVNFKVYGVNNTFKEYSKEGVSFAKYTNVSSTLSASVEEKKNAVSGNLVKNWVEPGKFFREKMLKEGTVMPMPDIRDKMPERSFLPRSILAKLPFSTSKIYEMKRLFKASDNGSMEKMMRDSLGECERVPSRGETKRCVGSIEDMIDFATSVLGRNVVVRTTKNLNGSKGNVMVGRVNGINGGKITRSVSCHQSLFPYLLYYCHSVPMVRVYQVDLLDPKTKSKINQGVAVCHLDTSDWSPSHGAFLSLGSGPGRIEVCHWIFENDMSWTVAD 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01089 630 Pfam BURP domain 415 627 IPR004873 -
Car08g01089 630 SMART BURP_2 413 629 IPR004873 -
Car08g01089 630 ProSiteProfiles BURP domain profile. 415 629 IPR004873 -
Car08g01089 630 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 7 630 - -
Car08g01089 630 MobiDBLite consensus disorder prediction 206 249 - -
Car08g01089 630 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 7 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01089 Car-Chr8 10795227 10798055 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01089 - - gmx:100776642 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01089 08 10795227 10798055 Car07g01969 07 22861552 22863969 PCT
Car07g02022 07 24032687 24035784 Car08g01089 08 10795227 10798055 PCT