Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01065 ATGGAACTTTATAGTTTGATTTTCTGGTTACTTGGTTTGGTGCTTCATTTGCTGGTGAAGATTTCTTCTGCTGCTCTTTCTCCTTCTGGCATAAACTATGAAGTTGTAGCTTTGATGGCTATAAAGAATGAGTTGAACGATCCTCACAATGTTTTAGAGAGTTGGGATATTAATTCTGTTGATCCATGTAGCTGGAGGATGATTACTTGTAATCCAGATGGCTCAGTTTCTGCACTGGGATTGCCTAGTCAGAACGTGTCTGGTTCACTATCTCCTAGAATTGGAAATCTCAGTAACTTACAATCTGTGTTACTTCAGAATAATGCTATTTCGGGTCGTATTCCGGCTGCAATAGGAAACTTAGAAAAGCTTCAAACACTTGATCTGTCCAATAATGAATTTAGTGGCGATATACCTAGTTCTTTGGGACGCCTCAAGAACCTGAATTATTTGTGGTTAAATAATAACAGCCTTACAGGAGCATGCCCTCAGTCTCTTAGCAACATTGAAAGCCTAACCCTTGTGGATCTCTCCTACAACAATTTGAGTGGTTCCTTGCCAAGAATATCGGCAAGAACATTAAAGATTGTAGGTAATCCATTAATTTGTGGTCCAAAAGAAAACAATTGTTCTACCGTTTTGCCCGAGCCACTTTCCTTCCCACCAGACGCTTTAAAAGCTCAACCAAACACTGGTAAAAAAGGCCATCACGTTGCACTTGCTTTTGGTGCAAGTTTCGGCGCTGCTTTTGTCGTTGTGATTATAGTTGGATTTCTGTTTTGGTGGCGGTATAGACACAATCAACAGATATTCTTTGATATTAATGAGCATTACGACCCAGAAGTGCGCCTTGGTCATTTAAAAAGGTATTCATTCAAAGAGCTTCGGGCTGCAACTGACCATTTCAACTCAAAACACATTCTAGGAAGAGGTGGCTTTGGAATAGTTTACAAGGCATGCTTGAACGACGGGTCGGTTGTGGCTGTTAAAAGGTTGAAGGACTATAACGCAGCTGGTGGCGAGATTCAATTTCAAACAGAAGTTGAGACAATTAGTTTGGCTGTCCACCGGAATCTTTTGAGGCTTCGAGGGTTTTGCAGTACTCAGAATGAAAGACTCCTTGTTTATCCATACATGTCTAATGGTAGTGTAGCCTCTAGATTAAAAGATCATATTCATGGTCGGCCGGCCTTGGATTGGACAAGGCGGAAGAGAATAGCTTTAGGTACAGCAAGAGGATTGGTTTATTTACACGAGCAATGCGACCCTAAAATTATCCATCGTGATGTCAAAGCAGCCAACATACTGCTAGATGAAGACTTTGAAGCAGTTGTAGGCGATTTCGGTTTAGCTAAGCTTCTCGATCACAGAGATACTCATGTGACCACTGCCGTGCGTGGCACTGTTGGTCACATTGCTCCGGAATACCTATCCACAGGCCAGTCATCGGAAAAGACTGACGTGTTCGGATTTGGAATCTTGCTGCTTGAGCTGATCACAGGTCATAAGGCTCTAGATTTCGGTCGAGCAGCAAACCAGAAAGGTGTAATGCTCGATTGGGTTAAGAAGCTGCACTTGGAAGGAAGATTAAGTCAAATGGTAGATAAAGATCTAAAGGGAATCTTCGACATCGTTGAATTGGGAGAAATGGTTCAAGTAGCACTCTTGTGTACACAATTTAATCCTTCGCACCGTCCAAAAATGTCCGAAGTGTTAAAGATGTTGGAAGGAGACGGCTTGGCTGAGAGATGGGAGGCCTCACAGCGAATCGAAACACCTAGATTTCGGTTATGCGAAAATCCGCCTCAAAGATATTCAGATTTTATAGAGGAATCATCACTCATAGTAGAAGCCATGGAACTTTCTGGCCCTAGGTGA 1878 0.4233 MELYSLIFWLLGLVLHLLVKISSAALSPSGINYEVVALMAIKNELNDPHNVLESWDINSVDPCSWRMITCNPDGSVSALGLPSQNVSGSLSPRIGNLSNLQSVLLQNNAISGRIPAAIGNLEKLQTLDLSNNEFSGDIPSSLGRLKNLNYLWLNNNSLTGACPQSLSNIESLTLVDLSYNNLSGSLPRISARTLKIVGNPLICGPKENNCSTVLPEPLSFPPDALKAQPNTGKKGHHVALAFGASFGAAFVVVIIVGFLFWWRYRHNQQIFFDINEHYDPEVRLGHLKRYSFKELRAATDHFNSKHILGRGGFGIVYKACLNDGSVVAVKRLKDYNAAGGEIQFQTEVETISLAVHRNLLRLRGFCSTQNERLLVYPYMSNGSVASRLKDHIHGRPALDWTRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDTHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHLEGRLSQMVDKDLKGIFDIVELGEMVQVALLCTQFNPSHRPKMSEVLKMLEGDGLAERWEASQRIETPRFRLCENPPQRYSDFIEESSLIVEAMELSGPR 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01065 625 SMART serkin_6 302 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01065 625 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Car08g01065 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Car08g01065 625 Pfam Protein kinase domain 303 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01065 625 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Car08g01065 625 ProSiteProfiles Protein kinase domain profile. 302 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01065 625 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Car08g01065 625 Gene3D Phosphorylase Kinase; domain 1 271 378 - -
Car08g01065 625 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 625 - -
Car08g01065 625 Gene3D Transferase(Phosphotransferase) domain 1 379 594 - -
Car08g01065 625 SUPERFAMILY Protein kinase-like (PK-like) 279 576 IPR011009 -
Car08g01065 625 PANTHER PROTEIN NSP-INTERACTING KINASE 3 6 625 - -
Car08g01065 625 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Car08g01065 625 SUPERFAMILY L domain-like 32 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car08g01065 Car-Chr8 10396329 10401325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car08g01065 67 625 Receptor kinase-like Gene Family AT1G60800 76.056 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Car08g01065 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01065 - - gmx:100784164 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g01065 08 10396329 10401325 Car04g01066 04 10827595 10831868 PCT